Halobacterium salinarum NRC-34001: LJ422_10795
Help
Entry
LJ422_10795 CDS
T07949
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LJ422_10795 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanr03021
]
LJ422_10795 (rpoB)
Enzymes [BR:
hanr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LJ422_10795 (rpoB)
Transcription machinery [BR:
hanr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LJ422_10795 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
OrfB_Zn_ribbon
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UEB92049
LinkDB
All DBs
Position
complement(1998712..2000538)
Genome browser
AA seq
608 aa
AA seq
DB search
MSTEREAKVYVNGSLVGTHENPEELAEQIREARRRGEVSEMVNVSVRDRTGEVIVNADAG
RARRPLLVVENGEPVVTQEEVEAVKNGDIDFEDLVEAGKVEFIDAEEEEDILVGVEEEEL
TTDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPAANYRIRPDTRQH
LLHYPQKAMVNTQTTEQIGYDDRPAGQNFVVAVMSYEGFNIEDALVMNKGSVERALSRSH
FFRTYEGEERRYPGGQEDRFEIPGDDVRGARGEDAYTHLDDDGLVNPETKVDDSSVLLGK
TSPPRFLEEPEDMGGLSPQKRRETSVTMRSGEDGVVDTVTLMEGEDGSKLAKVSVRDERI
PELGDKFASRHGQKGVVGHLAPQEDMPFTQEGVVPDLVLNPHALPSRMTVGHVLEMLGGK
AGSLDGRSVDGTPFTGEGEDEIRGTLEDRGFKSSGKEVMYSGVSGEKIEAEIFVGTIFYH
KLYHMVSNKLHARSKGPVQVLTRQPTEGRAREGGLRVGEMERDTVIGHGAAMVLKERLLD
SSDREEIHVCGNCGMTAVENYEQRRVYCPNCEEETDVHSIEMSYAFKLLLDEMKALGIAP
RLELEEAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggaacgcgaagccaaagtctacgtcaacgggagtctggttggaacacacgag
aaccccgaagagttagcagaacagatccgggaggcgcgccgccgcggtgaggtctccgag
atggtgaacgtctcggtcagggaccgcaccggtgaggtcatcgtgaacgcggacgctggc
cgggcacgccggccgttgctggtcgtggagaacggcgagccggtggtcacccaggaggaa
gtggaggccgtcaagaacggcgacatcgacttcgaggacctcgttgaggcggggaaagtc
gagttcatcgacgccgaggaggaagaggacatcctcgtgggcgtcgaggaggaggagctc
acgaccgaccacacgcacctcgaaatcgacccgcagctcatcttcgggatcggtgcgggg
atgatcccgtaccccgagcacaacgccagcccccggattacgatgggggcggggatgatg
aaacagagtctggggctgccggcggcgaactaccgcatccgaccggacacccgccaacac
ctcctgcattacccgcagaaggcgatggtgaacacccagacgaccgagcagatcggctac
gacgaccggccggcgggccagaacttcgtcgtcgccgtgatgtcctacgaggggttcaac
atcgaggacgccctggtcatgaacaaggggtccgtggagcgcgcgctctcccgatcgcat
ttcttccgcacgtacgagggcgaggagcggcgctaccctggcggccaggaagaccgcttc
gagatccccggcgacgacgtgcgaggcgcacgcggtgaggacgcgtacacgcacctcgac
gacgacggcctggtgaaccccgagacgaaagtcgacgattcgtcggtgctgttggggaag
acgagtccgccgcggttcctcgaagaacccgaggacatgggcgggctgagcccgcagaag
cgccgcgagacgtcggtgacgatgcggtcgggcgaggacggcgtcgtggacacggtgacg
ctgatggagggcgaggacggctcgaagctcgcgaaagtctccgtgcgcgacgagcgcatc
ccggagctcggcgacaagttcgcgagccgacacggccagaagggcgtcgtcggccacctc
gcgccccaggaggacatgccgttcacgcaggaaggcgtggtgccggacctcgtgttgaac
ccccacgcgttgccgtcgcggatgacggtcggccacgtgctggagatgctcggcgggaag
gcggggtcgctggacgggcggtccgtcgacggcacgccgttcactggcgagggcgaggac
gagatccgtggcacgctcgaagaccgcggcttcaaatcctccggcaaggaggtcatgtac
tccggggtgtccggggagaaaatcgaggccgagatcttcgtggggacgatcttctaccac
aagctctaccacatggtgtcgaacaagctccacgcccggtcgaaggggccggtgcaggtg
ctgacccgacaacccaccgagggtcgcgcccgcgagggcggactgcgggtcggtgagatg
gagcgtgacaccgtcatcgggcacggcgcggcgatggtgctcaaagagcgcctgctcgat
tcctcggaccgcgaggagatccacgtgtgtgggaactgcggcatgacggccgtggagaac
tacgagcagcgccgggtgtactgtccgaactgcgaggaggagaccgacgtacacagcatc
gagatgagttacgcattcaagcttctactcgacgagatgaaggcgctcggcatcgcgccg
cgcctggaactggaggaggcagtgtaa
DBGET
integrated database retrieval system
