Haloplanus rubicundus CBA1112: DU484_18305
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Entry
DU484_18305 CDS
T05557
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DU484_18305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haq03021
]
DU484_18305
Enzymes [BR:
haq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DU484_18305
Transcription machinery [BR:
haq03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DU484_18305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
DUF5715
Motif
Other DBs
NCBI-ProteinID:
AXG11651
UniProt:
A0A345EHH9
LinkDB
All DBs
Position
complement(3347670..3349229)
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AA seq
519 aa
AA seq
DB search
MNRQSRRTISREYFSQERLAEHHFRSFNAFLDRGMQEVVDEKERIETDIGDKEGQEPVFV
ELGDVRVETPRVREADGSEELLYPQEARLRNITYAAPVFMEMAIVRGGEEEEEVVVDSTE
TKVGRMPIMVGSRRCNIAELTREELIDIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
AEYDTKYGDEIQVAKTFSQRRGYRALVLCERNREGILEVSFPSVSGSVNFVTLVRALGLE
SDEEIVHRVSDDPEIVKFMLENLEMAEVQSEEEAIETLGKRVAGGQGKNYQLKRANYVID
RYLLPHLHEEGVDEEEVRINKAYYLCRMAEACFELALERREADDKDHYANKRLKVSGDLM
RDLFRTALNKLARDVKYQLERANMRNRQLTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQNVEDEQELKRELASMGVEGIPGIEGVDSMAD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacagagccgacgcacgatttcacgagagtatttctcacaggaacggctcgcc
gaacaccacttccgctccttcaacgccttcctcgaccgggggatgcaggaagtcgtcgac
gagaaagagcggatcgagacggacatcggcgacaaggagggacaggagccggtcttcgtc
gaactcggcgacgtgcgcgtcgagacgccgcgggtccgtgaggccgacgggagcgaggaa
ctcctctacccgcaggaggcccgcctgcgcaacatcacctacgccgcgccggtgttcatg
gagatggccatcgtccgcggcggcgaggaagaggaggaagtcgtcgtcgactccaccgag
acgaaggtgggacgcatgccgatcatggtcggctcccgccgctgcaacatcgccgaactc
acgcgcgaggaactgatcgacatcggcgaggacccggtcgaccccggaggatatttcatc
gtcaacggctccgagcgggtgctgatgacgagcgaggacctcgcgcccaacaagatcctc
gcggagtacgacacgaagtacggcgacgagattcaggtcgccaagaccttctcccagcgc
cgtggctaccgcgcgctggtgctctgtgagcgcaaccgcgaggggattctcgaagtctcc
ttcccctccgtctcggggagcgtcaacttcgtcacgctggtgcgcgcgctcgggctggag
tcggacgaggagatcgtccaccgcgtcagcgacgaccccgagatcgtgaagttcatgctg
gagaacctggagatggccgaggttcaaagcgaggaagaggccatcgagacgctcggcaag
cgggtcgccggcgggcaggggaagaactaccagctgaaacgcgccaactacgtcatcgac
cgctacctcctgccgcacctccacgaggagggcgtcgacgaggaggaggtccgcatcaac
aaggcgtactacctctgccgaatggcggaggcgtgtttcgaactcgccctggaacggcgc
gaggccgacgacaaggaccactacgcgaacaagcgcctgaaggtcagcggcgacctgatg
cgtgacctgttccggacggcgctgaacaagctggcccgcgacgtgaagtaccagctcgaa
cgcgcgaacatgcgcaaccggcagctgacggtcaacaccgtcgtccgctcggacgtgctg
accgagcggctggaacacccgatcgcgacgggcaactgggtgggcggtcgctcgggcgtc
tcccagctggtcgaccgcacggactacatgggcgtgctctcgcacctccgtcggctgcgc
tcgccgctctcgcggtcccagccgcacttcgaggcacgtgacctgcacgcgacccagtgg
ggtcgcatctgtccctccgagacgccggaggggccgaactgtgggctggtgaagaacttc
gcgcaggcgatggagctctcccagaacgtggaggacgaacaggaactcaaacgcgaactg
gcgtcgatgggggtcgagggaatccccggaatcgaaggcgtcgactcgatggcggattaa
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