Halorhabdus sp. SVX81: SVXHr_0817
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Entry
SVXHr_0817 CDS
T09281
Symbol
rpoB2
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHr_0817 (rpoB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_0817 (rpoB2)
Enzymes [BR:
hasv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHr_0817 (rpoB2)
Transcription machinery [BR:
hasv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHr_0817 (rpoB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Acetate_kinase
Motif
Other DBs
NCBI-ProteinID:
WEL16994
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All DBs
Position
844099..845664
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AA seq
521 aa
AA seq
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MDTENRRTISREYFSRDRLAEHHFRSFNAFLDRGMQEVVDEKATIETDIGDKEGEEPVWV
ELGDVRIVTPRVREADGSEELLYPQEARLRNITYAAPVFMEMAIVKGGEEEEERVVDQTE
TKVGRMPIMVGSQKCNIAGFSDEELIDIGEDPADPGGYFIVNGSERVLMTSEDLAPNKIL
AEYDTKYGDEVQVAKTFSQRRGYRALVLTERTRDGLLEVSFPSVSGSVNFVTLVRALGLE
SDEEIVHQVSDDPEIVKFMLENLEAAEVQTQEEAIETLGQRVASGQGKNYQLKRANYVID
RYLLPHLHEEGVDEEEVRINKAYYLCRMAEACFELALDRRESDDKDHYANKRLKVSGDLM
RDLFRTALNKLARDVKYQLERANMRNRQLSVSTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQHVEDERELKQTLAEMGVEGIPAIETAAQQPADD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacacggaaaaccgacgcaccatatcacgggagtacttctcgagggatcgactcgcc
gaacaccacttccggtcgttcaacgcgttcctcgaccggggcatgcaggaagtcgtcgac
gagaaagccaccatcgaaaccgacatcggcgacaaggagggcgaggaaccggtctgggtc
gagttgggcgacgtccggatcgtcaccccgcgagtccgggaggccgacggcagcgaggag
ctgctgtacccccaggaagcccgcctccggaacatcacctacgccgcgcccgtcttcatg
gaaatggcgatcgtcaagggcggcgaggaagaggaagagcgggtagtcgaccagaccgag
accaaggtcggccggatgccgatcatggtcggctcacagaagtgtaacatcgccggcttc
tccgacgaggaactcatcgacatcggcgaggatcccgccgaccccggtgggtacttcatc
gtcaacggctccgagcgcgtgttgatgaccagtgaggaccttgcgccgaacaagatcctc
gccgaatacgacacgaagtacggcgacgaggtgcaggtcgccaaaacgttctctcagcgc
cgtggctaccgtgccctcgtgttgaccgagcggacgcgtgacgggctgctcgaagtctcg
ttcccgagcgtttcgggctcggtcaacttcgtcacgctcgtgcgagcactcggcttagag
agcgacgaggagatcgtccaccaggtcagtgacgatcccgagatcgtgaagttcatgctc
gaaaacctggaggctgccgaagtccagacccaggaggaagccatcgagacgctgggtcag
cgcgtcgcctccggacagggcaaaaactaccagctcaagcgggcgaactacgttatcgac
cggtacctcctgccacacctccacgaggagggcgtcgacgaggaggaagtccggatcaac
aaggcctactacctctgtcggatggccgaggcgtgtttcgaactcgcactcgaccgccgg
gagtcagacgacaaggaccactacgccaacaagcgtctgaaagtctccggggacctcatg
cgggacctcttccggacggcgctgaacaagctggcacgcgacgtgaaataccagctcgaa
cgcgccaacatgcgcaaccgccaactgtccgtctcgacggtcgtccggtcggacgtgctg
accgaacggctcgaacacccgattgcgaccgggaactgggtcggcgggcgctccggcgtg
agccagctggtcgatcggaccgacttcatgggtgtgctttcccaccttcgtcggctgcgc
tcgccgctgagtcggtcacagccacacttcgaagcgcgtgacctccacgccacgcagtgg
ggccggatctgtccctccgagacgccggaggggcccaactgtgggctggtgaagaacttc
gcgcaggcgatggaactctcccagcacgtcgaggacgaacgggaactcaaacagacgctc
gctgagatgggggtcgagggcatccccgccatcgagacagccgcacaacagcccgcggac
gattaa
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