Halorhabdus sp. SVX81: SVXHr_2371
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Entry
SVXHr_2371 CDS
T09281
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHr_2371 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_2371 (rpoE1)
Enzymes [BR:
hasv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHr_2371 (rpoE1)
Transcription machinery [BR:
hasv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHr_2371 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
FtsK_SpoIIIE_N
Motif
Other DBs
NCBI-ProteinID:
WEL18521
LinkDB
All DBs
Position
2380965..2381534
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AA seq
189 aa
AA seq
DB search
MYKRVRLRDTVEVPPEHLADVTPGLVKRLLQEKLEGRMDEDVGSIVSVTEVHDIGEGAVV
PNEPGVYYVAEFDALTFDPQMQEVVDGEVVEVVNFGAFVGIGPVDGLLHVSQISDEYLAY
DGENQQLASRDSNRTLTVGDSVRARIVTKSIDERNPRDSKIGLTAKQVGLGKHGWLDEER
KARAETGES
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaacgggttcgattgcgcgacacggtcgaggtaccgcccgagcatctggcagac
gtgacgccggggctcgtgaaacgactgctacaggagaaactcgaaggccgcatggacgag
gatgtcggcagcatcgtcagcgtcaccgaggtccacgacatcggcgagggggcggtcgtc
cccaacgagcccggcgtctactacgtggccgagttcgacgccctcaccttcgatccccag
atgcaggaggtcgtcgacggcgaggtcgtcgaggtcgtcaacttcggcgcgttcgtcggg
atcggcccggtcgacggactcctccacgtctctcagatctccgacgagtacctggcctac
gatggcgaaaaccagcaactcgcctcccgggattcaaaccggacgctcacggtcggggac
tcggtgcgcgcccggatcgtcaccaagtccatcgacgagcgcaacccccgggattcgaag
atcggcctgacggccaagcaggtcggcctgggcaaacacggctggctcgacgaggagcgc
aaggcacgcgcggagacgggtgagagctga
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