Hafnia alvei: AT03_02990
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Entry
AT03_02990 CDS
T03425
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
hav
Hafnia alvei
Pathway
hav00310
Lysine degradation
hav01100
Metabolic pathways
hav01110
Biosynthesis of secondary metabolites
hav01120
Microbial metabolism in diverse environments
Module
hav_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
AT03_02990
Enzymes [BR:
hav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
AT03_02990
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AIU71453
UniProt:
A0A097QY94
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All DBs
Position
complement(646311..648530)
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AA seq
739 aa
AA seq
DB search
MNIIAIMNDLSAYFKEEPLRELHQELEKEGFRIAYPKDRNDLLKLIENNSRLCGVIFDWD
KYNLELSAEISELNKLLPIYAFANTYSTLDVNMSDLRLNVRFFEYALGSAQDIATKIRQS
TDQYIDTILPPLTKALFKYVKEEKYTFCTPGHMGGTAFDKSPVGSLFYDFFGENTMRSDI
SISVSELGSLLDHSGPHRDAEEYIARTFNADRSYIVTNGTSTANKIVGMYSSPAGATILI
DRNCHKSLTHLMMMSNVVPVYLRPTRNAYGILGGIPQSEFTRASIEEKVKNTPNATWPVH
AVVTNSTYDGLFYNTEYIKNTLDVKSIHFDSAWVPYTNFHPIYQGKAGMSGERVPGKIIY
ETQSTHKLLAAFSQASMIHVKGEINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNA
GKRLINGSIERAIRFRKEIRRLRTESDGWFFDVWQPDNIDEVACWPLNPRNEWHGFPNID
NDHMYLDPIKVTLLTPGLSPNGTLEEEGIPASIVSKYLDEHGIIVEKTGPYNLLFLFSIG
IDKTKALSLLRALTDFKRVYDLNLRVKNVLPSLYNEAPDFYKEMRIQELAQGIHALVKHH
NLPDLMYRAFEVLPKLVMTPHDAFQEEVRGNIEPCALDDMLGKVSANMILPYPPGVPVVM
PGEMLTKESRPVLSFLQMLCEIGAHYPGFETDIHGVHRDGATGKYMVVVLKQGADEPGDK
PSDTVKKAPGKKPSAAKKS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattgccatcatgaacgatttaagcgcttattttaaggaagaacccctgcgc
gagttgcatcaagagttagagaaggaaggcttccgcattgcttatcccaaagaccgcaac
gatctactgaaactgattgaaaacaactcccgtctgtgtggcgtcattttcgactgggat
aaatataaccttgaactcagcgctgaaatcagcgagctcaacaaactgctgccaatttat
gccttcgccaacacctattcaacgctagacgttaacatgagcgatctgcgtcttaacgtt
cgcttctttgaatatgcattaggcagcgcgcaagacattgccaccaagatccgccaaagc
accgatcagtatattgataccattctgccaccgctgaccaaggcgctgttcaaatacgtc
aaagaagagaaatacacgttctgtacgccggggcatatgggcggaacagcgttcgataaa
agccctgtcggtagcctgttctatgatttcttcggtgaaaacaccatgcgttcggatatc
tcgatctccgtatctgaactcggatcgctgctcgatcatagcggcccacaccgtgacgct
gaagagtatattgcgcgcacgtttaacgccgatcgcagctatatcgtaaccaacggaaca
tctacggcgaataaaattgttggcatgtattcatctcctgccggtgccactattctgatc
gaccgtaactgccataaatcattgacccatttgatgatgatgagcaacgtggttcccgtc
tatctgcgcccaacccgtaacgcctacggcattttaggcgggataccgcaaagcgagttc
acccgcgccagcattgaagagaaagtgaaaaatacgcccaatgcgacatggccggtgcat
gcggtagtcaccaactctacctatgacggcctgttctacaataccgaatacatcaaaaac
acgcttgatgttaagtcgattcacttcgattcggcatgggtgccttacaccaatttccat
ccgatttaccaaggtaaagcagggatgagcggtgaacgtgtgccgggcaaaatcatctac
gaaacccagtccacccacaaactgttggccgcattctcacaggcatcgatgatccacgtg
aaaggtgagatcaacgaagaaaccttcaatgaagcctatatgatgcatacctcaacatca
ccgcattacgggatcgttgcgtcgacggaaaccgcggcggctatgatgaagggcaacgcc
ggtaagcgtttaattaatggttcaattgaacgagcgatccgcttccgtaaagagatccgc
cgcttacgtacagaatctgatggctggttctttgacgtatggcagccggataacattgat
gaggttgcttgctggccactcaatccacgtaatgaatggcatggattcccgaacatcgac
aacgatcatatgtatctggatccgatcaaagtgactctgctgaccccaggtttaagccca
aatggcacgctggaagaggaagggataccggcgtcgatcgtgtcgaaatatctggatgag
cacggcatcatcgtggaaaaaaccgggccatataacctgctcttcctgtttagtatcggg
atcgataaaaccaaggcgttgagcttgttgcgggcattaaccgatttcaaacgcgtgtat
gacctcaacctgcgcgtgaaaaacgtgttgccatcgctctataacgaggcgcctgatttc
tataaagagatgcgaattcaggagttggctcaggggattcatgctctggtgaaacaccac
aatctaccagacctgatgtatcgtgcatttgaggtattaccaaagctggtgatgacgccg
catgatgcgttccaagaagaagtgcgtggcaatattgagccatgtgccttggatgatatg
ttagggaaagttagcgccaacatgatcctgccgtatcctccgggtgttccggtggttatg
ccgggagaaatgctcactaaggagagccgccctgttctgagcttcttgcagatgctatgt
gaaattggcgcacactatccgggctttgaaacggatattcacggcgttcatcgtgatggt
gcaacgggtaaatacatggtcgtggtgctcaaacaaggcgcagatgaaccgggtgataaa
ccgagtgatacggtgaagaaagcgccgggtaaaaaaccatcagcggcgaagaagtcataa
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