Hafnia alvei: AT03_21180
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Entry
AT03_21180 CDS
T03425
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AT03_21180
Enzymes [BR:
hav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AT03_21180
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AIU74671
UniProt:
A0A097R7H0
LinkDB
All DBs
Position
complement(4637091..4639067)
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AA seq
658 aa
AA seq
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MAMVSVVALITICIFVVIQLFHFVDQRKEDYVQQLENLAHSVREPLSEAMLNMDAVRAQK
ILDSLVPIGILSRADVMLPNELQALKGRFPQERAVPEAVMKIFDLPVQVSMPLYGIERNI
AARQPSSYLVLQADSFRIYQFILSTLSTMVSTYLLLALILTVAISWCMNRLLVYPLRALA
QELRSMPLDTPNFHQLTPPPSHGDDELGLLVRNYNRNQQALEKAHQVMSRMSTRNPLTNL
PNMTLFVPLLEQHLLVCRKENSGIVVINISTLQEAMGVLDTTQRDALLASLVSRLKECVS
EADMLAQVNQDRFVVLVRNVERPHSLMLLAKNLMDSITRQLDLETLALRPTASIGISFYQ
PNAEETMDAKKEAELLLSQASSAMNMAMREGKNQILFFEPRLARKAKERLTKETEIMNAL
TQGDFSLYLQPQIDLRTGRLAGAEALIRWNRKDGELTLPSEFIPLAEEVGGIEALDEWVI
SESMKILSAWQKQNIGVPISLNVSGIQIANLSYVELLERMLLEYQLDPHMLHLEVTETAY
ISNMEQAAEMLARLRKTGIKIALDDFGMGYAGLNYLQHLPVDIIKIDKNFVDQIPADDAL
VRIVASIADVLALDVVAEGVESHAQCEWLLEHGIYYAQGYWFSPALPQEEFERKYFLI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtgtcggttgtggcgctcattacgatttgtatttttgtcgtgattcagctg
ttccattttgtggaccagcgtaaggaggactacgtccagcaactggagaatttggcccat
tcggtacgtgagccgctttctgaagccatgttgaatatggacgcggtgagagcccaaaaa
attctcgatagtttagttccgatcggcattctgagccgtgccgacgtgatgttgcccaat
gagcttcaggcgctaaaaggacgttttcctcaagagcgagccgtacctgaagcggtgatg
aagattttcgatctgcccgttcaggtttcaatgccgctttacggcattgaacgcaatatc
gcggcgcgacagccgtcgtcttacttggttttacaggccgattcgttccgcatttatcag
tttattttgtcgacgctgtctaccatggtatcgacctatcttttgctggccttgattctt
accgttgccatcagttggtgtatgaatcggctattggtctacccgttgcgcgcgctggcg
caagagttgcgcagcatgccgcttgatacccctaattttcatcagcttacgccacctcca
tcgcacggagatgatgagctgggcttattggtgcgcaactataatcgtaatcagcaggcg
ttagagaaagctcatcaggtgatgagccgcatgtctacgcgcaatcctctgaccaatttg
cctaatatgacgttgtttgttcctctactggaacaacatttattggtttgccgcaaagag
aattccggcattgttgtgattaatatcagtacattgcaagaggcgatgggggtattggac
accacacagcgcgatgcgttactggcgtcattagtgagccggttgaaagagtgtgtgagc
gaagccgatatgctggcgcaggttaatcaggatcgctttgtggtactggtgcgtaacgtt
gaaaggccgcattcgctgatgctcttggcgaaaaacctgatggactccattacgcggcag
cttgatctggaaacgttggcgctacggcctacggctagcattgggatatcgttttatcag
ccaaatgctgaagagacgatggatgccaagaaagaggccgaacttctcttgagtcaggca
agttccgctatgaatatggcgatgcgtgaaggcaaaaaccaaatcctgttctttgaaccg
aggctggcccgcaaggctaaggagcggttaaccaaagaaactgaaattatgaacgcgctc
acccaaggcgatttctctctttatcttcaaccgcagattgacttgcgcacgggccgcttg
gcgggtgcagaagcgctaatccgctggaatcgcaaagacggcgagctgactttaccttct
gaatttatcccgttggcggaagaagtgggtggcatagaagcgctggatgagtgggtgatt
agcgagtcgatgaaaatattgtcggcttggcagaagcaaaatatcggcgtgccgatttcg
ctgaatgtttcaggtattcaaattgccaatctcagctacgttgagctgctggaaagaatg
ttgttagagtaccaactcgatccgcatatgctgcatcttgaggtcacggaaacggcttat
atcagcaatatggaacaggccgcagagatgctggcgcgcttgcgcaaaaccggtatcaag
attgctttagatgattttggtatgggctacgcgggtttgaattatttgcagcacctgccc
gtagacatcattaagatcgataaaaactttgtcgaccaaatccctgccgatgatgctctg
gtgcggattgtggcgtcgattgccgacgtgctggcattggacgtggtggccgagggcgtg
gaatctcatgcgcaatgtgagtggctgcttgaacacggtatctactacgcgcaaggttac
tggttctctcctgcgttaccgcaggaagaatttgagagaaagtattttcttatttaa
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