KEGG   Helicoverpa armigera (cotton bollworm): 110377060
Entry
110377060         CDS       T05609                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110377060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haw03021]
    110377060
Enzymes [BR:haw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110377060
Transcription machinery [BR:haw03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     110377060
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4
Other DBs
NCBI-GeneID: 110377060
NCBI-ProteinID: XP_063896320
EnsemblRapid: LOC110377060
LinkDB
Position
21:complement(join(8764262..8764468,8765049..8765213,8765685..8765888,8766524..8766730,8768220..8768358,8768806..8769020,8769797..8769992,8770432..8770522,8771674..8771827,8772351..8772550,8773144..8773204,8773527..8773674,8774551..8774717,8775471..8775622,8775926..8776179,8776577..8776749,8777176..8777322,8777702..8777794,8777902..8778231,8778333..8778419))
AA seq 1129 aa
MNQKKIAKNPSLAYTSNPDYRKPPKIANPYLQCLGAPHIDSFNYMLGDGLQAAIADLVPA
EFESPTGERVKITIDEAGFAKPSVPMEAVGVKNQTVLPTECRQRAATYKGDFKIRMTVTI
DEKNITVDRSLGSLPIMVKSKMCHLADLSPEELVEHNEHADEWGGYFIVKGHERLARMLL
VTRRNYPVAIKRSGWRMRGNLFSDYGVMVRCVTSDQTSTNNVLHFLNNGTCKLMFSYRKM
MYYAPLLLIMKCLVDWPDHYIYRLLLHGKKNDLYYVNCIQNMLRELHEEGLHSSHECLSY
LGRMFRPKLYDLPPWASDLDAAHFLINRCVLIHLKEHKDKFNALVFMAQKLYDLVQNKCK
VEGADAVMVQELLVGGHLYLQILKERLQQLITNVRIQIIKKAKTSKKLVIGTHELQQMLR
SSGNLEQKMETFLATGNAPSNNVTLAQYKGLTIVAENINRMRYMSHFKSIHRGSFFMEMR
TTEARQLLPDAWGFVCPVHTPDGAPCGLLNHLTCTAQVTQPADPKQVAALPQVLERCGME
PISSVSQTPLSRDVYKYPVFVDGKLVGYFAEDTVDKSAAYLRTLKIKGEEVPITTEIVVV
PKKQICSQYAGVFLMTSECRLMRPVINSSSQQLELIGTMEQLYLDIAVTHNEIIKGKTTH
VELSQTAFMSNLAQLVPMPDCNQSPRNMYQCQMGKQTMGTPIHTWLTNAETKLYRLQTPA
TPLFRPTHYDNIGLDDYPCGTNAIVAVISYTGYDMEDAMIINKSSYERGFAAGSVYKADF
IELAHPASYFCRDPSKPDLGKHIDDDGLPAVGARVKPEDPFYSFYDGEKSTFVVSRYRGK
EEVFVDSVRLCGDFSARPLKKACVMLRLQRNPTVGDKFASRAGQKGICSQKWACEDLPFT
ESGLVPDVLFNPHGFPSRMTIAMMIECMAGKAASLHGHVHDATPFRFNEKDTAINYFGRL
LEASGYNYYGTERMYSGVDGREMDADIFFGVIHYQRLRHMVSDKWQVRTTGAVDALTRQP
VKGRRRGGGVRLGEMERDALVSHGAAFLLHDRLFHCSDKTEAILCSKCGTLLGPIVGRSE
TSKETCRLCGEGNLVSIAIPYIFKFFVTQLACVNINVKINCSEQLALTA
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgaatcaaaagaaaatagccaagaatccttccctagcttatacaagcaatccggactac
cggaagccgccgaaaatcgcaaacccttatctacaatgccttggagcgcctcatatagac
tctttcaactatatgttgggcgatggtttgcaagctgcaatcgcggaccttgttccagcc
gagtttgagtcgcctaccggagaaagggtcaaaataactatagatgaggctgggtttgct
aaacccagtgttcctatggaggctgtgggtgttaagaaccagacggtactgcctacagag
tgccgacaaagagctgctacttacaaaggggactttaagatacgaatgacagtcactatt
gatgagaaaaatattacagtggataggtcacttggatctttgcctatcatggttaagtcg
aaaatgtgccacttagcagacctgtctcctgaagaattggtggaacacaatgaacatgct
gacgagtggggaggatattttattgttaagggtcatgagcgactagctcgcatgcttcta
gtgacgagacggaattatccagttgccatcaagcggtcaggatggaggatgagagggaac
ctgttctccgactacggtgtcatggtccgatgtgtcacttctgatcagactagtacaaac
aacgtccttcacttcctaaacaacggtacttgcaagttaatgttctcgtaccgcaagatg
atgtactacgctccactgctgctcatcatgaagtgtctggtggactggcccgaccactac
atctacaggctgctgctgcacgggaagaagaatgatctgtattatgtcaattgcatccaa
aacatgctccgtgagctccacgaagaaggactccactcctcacacgagtgcctctcgtac
cttggccggatgttcaggcccaagctctacgacctgccgccctgggcctcagacctggat
gcagcccacttcctcatcaaccggtgtgtgttgatacatttgaaggaacacaaggataag
ttcaatgccctcgtcttcatggctcagaaactatatgatttggtgcagaataagtgtaag
gtagaaggtgctgatgcagtgatggtccaagagctcctagtcggtggacatctatacctt
cagatcctgaaggaacggcttcagcagctgatcaccaatgtcaggatacagatcatcaag
aaagctaagactagcaagaaacttgtcattggaacgcacgagctacaacaaatgctccgc
agttcaggcaacttggagcagaagatggaaaccttcctggcgaccggcaatgctccctcc
aacaatgtcactctcgcacagtacaagggacttactattgtagctgagaatattaatcgg
atgcgctatatgtctcatttcaagtctatccaccgagggtcgttcttcatggagatgcgt
accacagaggctcggcagctgctgcccgacgcgtggggcttcgtgtgccccgtgcacacc
cccgacggagcaccctgcggcctgctcaaccatctcacctgcactgcacaggtaacacaa
cccgccgacccgaagcaagtagcagccttaccgcaagttttagaaagatgcggtatggag
ccaatcagctcggtatctcaaacccccctctcccgtgacgtgtacaagtacccagtgttc
gtcgacggcaagctggtgggctacttcgccgaggatacggtggacaagtccgcagcctac
ctccgaaccctcaagattaagggggaggaggtgcctattactacggagatcgtggtcgtg
cctaagaagcagatatgctcccaatacgcgggcgtattcctgatgacgagcgagtgtcgt
ctcatgcggcccgtcatcaacagcagcagtcagcagctcgagctgatcggcaccatggaa
caactgtacctcgacatcgccgtcacacacaatgagattattaaaggtaaaacgactcac
gtggagttatcgcagactgctttcatgagcaacttggcacaactcgtacctatgccggat
tgtaaccagtcgccacgtaacatgtaccaatgtcagatgggtaaacagacaatgggtaca
cctattcacacgtggttaacgaatgcggagaccaaactgtacagactgcagactcccgct
acgcctctgtttagaccgacacattacgataatatagggctggatgactatccttgtggg
accaatgctattgttgctgttatttcttatacgggctacgacatggaagacgcgatgata
ataaacaaatcttcctacgagcgaggttttgccgccggctctgtttacaaagcagacttt
atagagctcgctcatcctgcctcttacttctgccgcgacccatccaagcctgacctcggc
aagcacatcgatgatgatggtctacccgctgtaggggccagggttaaaccggaggatcct
ttctacagtttctacgacggcgagaagagtacgtttgtagtaagccgttaccgcggcaag
gaggaggtgttcgtggacagcgtgcggctgtgcggggacttcagcgcccggccgctcaag
aaggcctgcgtcatgctgcggctacagcgtaacccaacagtaggtgacaagttcgcttcc
cgagcgggtcagaagggcatctgttcccagaagtgggcatgcgaggacctacccttcacg
gagtcagggctggtgcctgatgtgctgttcaaccctcacggcttcccttcccgaatgact
atcgctatgatgatcgagtgcatggccgggaaggctgctagcttgcatggacatgtccac
gacgccacaccattccgtttcaacgagaaggacacagctataaactacttcgggcgtcta
ctagaagcgtcggggtacaactactacggcaccgagcgcatgtacagcggggtggacgga
cgggagatggacgctgacatattcttcggcgtcattcactaccagcggcttaggcatatg
gtgtctgataagtggcaggtccgtacaacgggcgcggtagacgctctaacccgtcagccg
gtgaagggtcgtcgccgcggtggtggtgtgcgtctcggcgagatggaacgcgacgctctc
gtgtcacacggcgctgcattcttgctgcatgaccgactcttccactgctccgataagact
gaggctatcctatgctcaaaatgcgggactctactcgggccgatcgtcggtcgcagtgag
acgagtaaagaaacttgccgactgtgcggagagggcaacctcgtgtctatagccatacca
tacatcttcaaattctttgtcacacaactcgcttgtgttaatattaatgttaagatcaac
tgtagtgaacaacttgcgttaaccgcgtaa

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