Halorubrum sp. 2020YC2: KI388_05865
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Entry
KI388_05865 CDS
T08040
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz00020
Citrate cycle (TCA cycle)
hazz00640
Propanoate metabolism
hazz00660
C5-Branched dibasic acid metabolism
hazz00720
Carbon fixation pathways in prokaryotes
hazz01100
Metabolic pathways
hazz01110
Biosynthesis of secondary metabolites
hazz01120
Microbial metabolism in diverse environments
hazz01200
Carbon metabolism
Module
hazz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hazz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KI388_05865 (sucD)
00640 Propanoate metabolism
KI388_05865 (sucD)
00660 C5-Branched dibasic acid metabolism
KI388_05865 (sucD)
09102 Energy metabolism
00720 Carbon fixation pathways in prokaryotes
KI388_05865 (sucD)
Enzymes [BR:
hazz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
KI388_05865 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QWC20467
UniProt:
A0A8E8EYV7
LinkDB
All DBs
Position
complement(1197508..1198377)
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AA seq
289 aa
AA seq
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MSIFVDDDTRVVVQGITGGEGKFHAGQMIEYGTNVVAGAVPGKGGQEVDGVPVYDTVDEA
VEAEDADASVVFVPPAFAADAVFEALDTDLDLAVAITEGIPTQDMAKVNKRLSETDTRLL
GPNCPGIITPGEAKLGILPGNIFSEGNVGLVSRSGTLTYQVVDNLTERGLGQSTAIGIGG
DPIIGTSFVDALEAFEADSDTDAVVMCGEIGGEDEEQAAKFIGEHMDTPVAGFIAGRTAP
PGKRMGHAGAIVSGSGTGTAQSKIDALNDAGVPVGDTPEEVADHVEDFL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgagcattttcgtcgacgacgacaccagagtagtggtccaggggatcaccggcggggaa
gggaagttccacgccggccagatgattgagtacggcaccaacgtcgtcgccggcgcggtg
cccggcaagggcgggcaggaggtcgacggcgtcccggtgtacgacaccgtcgacgaggcc
gtcgaggcggaggacgcggacgcctccgtggtcttcgtgccgccggcgttcgccgccgac
gcggtgttcgaggcgctcgacaccgacctcgacctcgcggtcgcgatcacggagggaatc
ccgacgcaggacatggcgaaggtgaacaagcgcctgagcgagacggacacgcgcctgctc
ggcccgaactgtcccgggatcatcacgcccggcgaggcgaagctcggcatcctccccggc
aacatcttctcggaggggaacgtcgggctggtctcgcggtcgggcacgctcacctaccag
gtcgtcgacaacctcaccgagcgcgggctcggccagtcgaccgccatcggcatcggcggc
gacccgatcatcgggacctccttcgtcgacgccctggaggcgttcgaggccgactccgac
accgacgccgtcgtgatgtgcggcgagatcggcggggaggacgaggagcaggccgcgaag
ttcatcggggagcacatggacacgccggtcgccggcttcatcgccgggcggaccgccccg
ccgggcaagcgcatgggccacgccggcgccatcgtctccggctccggcacgggcaccgcg
cagtcgaagatcgacgcgctcaacgacgcgggcgttcccgtcggtgacacccccgaagag
gtcgccgaccacgtcgaggacttcctctga
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