Halogeometricum borinquense: Hbor_28240
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Entry
Hbor_28240 CDS
T01359
Name
(GenBank) DNA-directed RNA polymerase, subunit B'
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hbor_28240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_28240
Enzymes [BR:
hbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hbor_28240
Transcription machinery [BR:
hbo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hbor_28240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
ADQ68367
UniProt:
E4NLR7
LinkDB
All DBs
Position
complement(2696058..2697629)
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AA seq
523 aa
AA seq
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MNRQDRRAVSRQYFSQERLAEHHFRSFNNFLERGMQEVVSEKATIDTDIGDKEGEEPVYV
ELGDIRIETPRVREADGSEELLFPQEARLRNITYAAPVFMEMSIIRGGEEEEEVVVDTTE
TKVGRMPIMVGSSKCNISNLTDEELVEIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
AEYDTKYGDEIQVAKTFSQRRGYRALVLCERNREGILEVSFPSVSGSVEFVTLVRALGLE
SDEEIVHRVSDDPEIVKYMLENLEEAEVQTEAEAIESLGKRVASGQGKNYQLKRANYVID
RYLLPHLHEDGVDEEDVRINKAFYLCRMAEACFELALERRDSDDKDHYANKRLKVSGDLM
KDLFRTALNKLARDVKYQLERANMRNRQLTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQNIEDEQALKRELASMGVEGIPGIEGPDPTNTPADD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacaggaccgacgcgcagtatcacgacagtatttctcacaggaacggctcgca
gaacaccacttccgttcgttcaacaacttcctcgaacggggtatgcaggaggtcgtcagc
gagaaggcgactatcgacacggacatcggcgacaaggagggcgaggagcctgtctacgtc
gaactcggtgacatccgcatcgagacgcctcgcgtccgcgaggccgacggctccgaggaa
ctcctgttcccgcaggaggcccgtctccgtaacatcacctacgccgcccccgtgttcatg
gagatgtccatcattcgcggtggcgaggaagaagaggaagtcgtcgtcgatacgaccgaa
acgaaggtgggccggatgcccatcatggtcggttcctcgaagtgtaacatcagcaacctc
actgacgaggaactcgtcgaaatcggcgaggaccccgtagaccccggtggctacttcatc
gtcaacggttccgagcgtgtgctgatgacctcggaggaccttgcgcccaacaagattctc
gccgagtacgacacgaagtacggcgacgagattcaggtcgcaaagacgttctctcagcgt
cgtggctaccgagcgctcgttctctgtgagcgcaaccgcgagggtattctcgaagtgtcg
ttcccctcggtctcgggcagcgtcgaattcgttacgctcgtgcgcgcactcggactcgaa
tccgacgaggagattgtccaccgcgtctccgacgaccccgagattgtcaagtacatgctg
gagaacctcgaagaggccgaggttcagacggaagccgaggcaatcgaaagtctcggtaag
cgcgttgccagcgggcagggcaagaactaccaactgaagcgcgcgaactacgtcatcgac
cgctacctcctcccgcatctccacgaggacggtgtcgatgaggaggacgtgcgcatcaac
aaggcgttctacctctgccgaatggccgaggcgtgcttcgagcttgccctcgaacgccgt
gactccgacgacaaggaccactacgccaacaagcgcctgaaggtgtccggcgacctgatg
aaggacctgttccggacggcgctgaacaagctggcacgcgacgtgaagtaccagctcgaa
cgcgcgaacatgcgtaaccggcagctaacggttaacaccgtcgtccggtcggacgtgctg
accgaacgcctcgaacaccccatcgcgaccgggaactgggtcggcggacgctccggcgtt
tcccaactcgtggaccggacggactacatgggtgtgctgtctcacctgcgccgtctccgc
agtccgctctcgcggagtcagcctcactttgaggcccgcgacctgcacgcgacccaatgg
ggtcgcatctgtccctccgagacgccggaggggccgaattgtgggctcgtgaagaacttc
gcgcaggcgatggagttgtcgcagaacatcgaggacgaacaggcactcaaacgagaactg
gcgtcgatgggtgtcgaaggtatccccggtatcgagggacctgaccccacgaacacgccc
gcggacgactaa
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