Halomonas sp. TD01: HPTD01_733
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Entry
HPTD01_733 CDS
T08977
Name
(GenBank) Sarcosine oxidase alpha subunit (EC
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp00260
Glycine, serine and threonine metabolism
hbp01100
Metabolic pathways
Module
hbp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPTD01_733
Enzymes [BR:
hbp01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
HPTD01_733
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
HPTD01_733
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
Pyr_redox_3
HI0933_like
DAO
GIDA
Pyr_redox
AlaDh_PNT_C
Thi4
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CAH1042255
UniProt:
A0AA35GXN8
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All DBs
Position
HaloTd01MainCirc:complement(765876..768926)
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AA seq
1016 aa
AA seq
DB search
MSQSKQQVFRLKTGGRIDRSRTLSFTFNGQRYQGHSGDTLASALLANGVDIVNRSFKYSR
PRGIVAAGAEEPNAIVQLGSTEAAQVPNVRATQQALFDGLAACSTNGWPNVQRDLMGLIG
KLGGQFMPPGFYYKTFMAPASMWLTYEKYIRKAAGLGRSPMEADPDSYDHLHQHCDVLVV
GAGAAGLSAALAAARGGARVIVADEQEEMGGSLLGSRETLDGKSADQWVARVLEELAGCE
NVTLLPRTTANGYHDHNFVTLHERRTEHLGETAPVVNGRRPVRSRMHRVRAGQVILATGA
HERPLVYAGNDVPGNLLASAVSTYIRRYGVVPGRQLVLSTSNDDGYRAALDWKEAGCEVV
AVVDAREAPAGDWVDAARAQGIKIITGSAVIEAKGSNRVTAARVAKIDIGAYRVSGPIQE
LACDTIASSGGYSPVIHLASHTGARPTWRDDILGFVPGLVKGVHACGGANGTYALGDVLA
EGVEAGIKAAAATGHAAQPVNLPSVERLQQGPAVALFQVPHEKPTLRGPKQFVDLQNDVT
AAGIELATREGFESIEHIKRYTAMGFGTDQGKLGNINGMAIAARCLNRSIPEVGTTVFRP
NYTPVTFGAIVGRHCRDLFDPERYTALHQWHVERGAEFEDVGQWKRPWYYPQKVNGTTET
MHEAVARECLAVREKVGILDASTLGKIDIQGPDAREFLARIYTNKWEKLAVGKCRYGLMC
KDDGMVTDDGVTSCLAENHFLMTTTTGGAAAILEWLELWHQTEWPELDVYFSSVTDHWAT
MTITGPEARKLLAEMTDIDLDRDSFKFMEWRAGKVAGVPARVYRISFTGELTFEINVQAN
YAMHVWQTLFKHGEKYGLTPYGTETMHVLRAEKGFIIVGQETDGSVTPEDLGMQWCVGYD
KPFSWIGKRALTRTDTKRENRKQLVGLRPKDPTVVLEEGAQIVFDPKHAIPMPMVGHVTS
SYYSPILDSGFALAVVKGGLKKMGETVYLPMADGQVHEAEIVSTIFYDPKGERQNV
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtccaagcaacaagtgttccgcctaaagacaggcggccgaatcgatcgctct
cgcacgttgagctttacctttaacggtcagcgttaccaagggcactctggagataccctg
gcttcggcgctgctggctaacggtgtggatatcgttaaccgcagctttaagtattcccgc
cccagaggcatcgtcgccgcaggcgctgaagagcccaatgccattgttcaattaggcagt
accgaagcggcacaggtgcccaatgttcgcgctacccagcaagcgctgtttgacggatta
gccgcctgtagcaccaacggttggcctaatgtacagcgtgacttgatgggcttgataggc
aagttaggtgggcaatttatgccgccgggcttctactacaagacgtttatggcaccggca
tcgatgtggctgacctacgaaaagtacattcgtaaggcggcaggtctgggccgcagccct
atggaagccgatccagacagctatgaccaccttcatcaacactgcgatgtgctggtcgtt
ggcgctggcgctgctggcttgtctgcagcattggctgctgcccgtggcggtgcgcgggtg
atcgttgccgatgagcaagaagagatgggcggctcactgttgggtagccgcgaaactctg
gatggcaagtcggcagaccagtgggttgctcgagtgcttgaagagctagccggatgtgag
aacgtcacactgctgccacgcaccacggctaacggctatcacgatcacaattttgtgaca
ctgcacgagcggcgtactgagcatctgggcgaaacggcgcctgtcgtcaatggccgccga
ccggtacgttcccgtatgcatcgagttcgcgctggtcaggtgatcctagccacaggcgct
cacgagcgaccattggtgtatgcgggaaatgacgttccaggcaacctattggcaagcgct
gtttctacctacattcgacgctatggtgtcgtgccaggtcgccaactggtgctctccacc
agcaacgacgatggctatcgcgccgccttagactggaaggaagcaggctgcgaggtggtg
gcggttgttgatgcccgcgaagcgcctgcaggggattgggtcgatgccgcccgcgcccaa
ggtatcaagatcatcaccggcagtgccgttatcgaggcgaaaggcagcaaccgagtcact
gccgcacgggtggccaagatcgatattggcgcttaccgagtgagtggcccgattcaggag
ttggcctgcgacactattgctagctcaggtggttatagcccggtcattcacttggcttct
cataccggcgcgcggcctacttggcgtgacgatatcctcggctttgtgccagggctagtg
aagggcgttcatgcctgcggtggcgctaatggtacctatgcgttgggagacgtacttgcc
gagggtgttgaggctggcattaaagcagccgcagccacaggccacgcggctcagccggtt
aacctgcctagcgtcgaacgtctccagcagggaccagcggtggcacttttccaggttccc
catgagaagcccacgctgcgcgggccaaagcaattcgtcgacctgcagaacgacgtcacc
gcagcgggcatcgaactggctacccgggaaggctttgagtccatcgagcatattaagcgc
tataccgcgatgggtttcggtaccgaccaaggcaagttgggcaatattaatggtatggcc
attgcagctcgctgcctgaatcgctccatccccgaggtgggcaccacggtgtttcggcct
aattatacgccggtgacttttggcgccatcgtcggtcgtcactgccgtgatctgttcgat
cctgagcgctataccgctcttcatcagtggcacgttgagcgcggcgccgagtttgaggat
gtcggccagtggaagcgtccctggtactacccacagaaggtgaatggcacgaccgagact
atgcacgaggcggtagcccgcgaatgtttagcggtgcgcgagaaagtgggtattctcgat
gcttcgacgcttggcaagatcgacattcaagggccggatgcgcgtgaattcttggcgcgt
atctataccaataagtgggagaagttggcagttggtaagtgccgttatggcttgatgtgc
aaagatgatggcatggtcactgatgacggtgtgaccagctgtcttgctgaaaatcacttt
ttgatgaccaccaccaccggtggcgcagcagcgatattggaatggttggagttatggcat
cagaccgagtggccagaactggatgtctacttctcttcagtgactgaccactgggccacc
atgacgatcactggccccgaagcgcgcaagctgctggctgagatgacagatatcgatctc
gaccgcgatagctttaagtttatggagtggcgtgcggggaaagtggccggggtgcctgcg
cgagtctatcgaatctcctttacaggtgagttgacctttgagattaacgttcaagccaac
tacgccatgcacgtgtggcagacccttttcaagcatggcgagaagtatggcttaacgccc
tatggcacagagaccatgcacgtcctgcgtgctgaaaaaggctttattatcgttggccag
gaaaccgacggctccgtgacgccggaagacctgggcatgcagtggtgcgtaggttacgac
aagcctttctcatggattggcaagcgagccctgacgcgaacggataccaagcgtgaaaac
cgcaagcagctggtaggtctgaggcccaaagatccaacggtggtgctggaggagggggcc
cagattgtgtttgatcctaagcatgcgatcccgatgcccatggtggggcatgtgacctca
agctactacagcccaattctggactctggatttgctttagcggtggtgaaaggcggcctc
aagaaaatgggcgaaaccgtctatctgcccatggcagacggccaagttcacgaagcggaa
atcgtcagcaccattttttatgatcccaagggagagcgccaaaatgtctaa
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