Hevea brasiliensis (rubber tree): 110648006
Help
Entry
110648006 CDS
T05150
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03020
RNA polymerase
hbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110648006
09124 Replication and repair
03420 Nucleotide excision repair
110648006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110648006
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110648006
Enzymes [BR:
hbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110648006
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110648006
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110648006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110648006
NCBI-ProteinID:
XP_021657771
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MEDDQEYDQPLNEEEEDDDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE
YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDL
VAKGFIEYIDTEEEETTMISMTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSARYTRRDHSI
SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRAL
HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKPSKDKKKKGA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaccaggagtacgatcagcctctaaatgaggaggaagaagacgatgatgag
atcacgcaggaggacgcatgggctgtcatctctgcctattttgaagagaaaggtctggtg
cgtcaacaacttgattcattcgatgagtttattcagaatacgatgcaggaaatcgtcgat
gagtcggctgatattgagattcgtcccgagagccagcacaaccctggccaccagtctgat
ttcgctgagactatctataagataagctttggccagatttatttgagcaagcctatgatg
accgagtctgatggagagactgcaactttatttcctaaagctgcaaggttgaggaaccta
acatactcagcccccttgtatgtagatgttacgaagagggtcataaagaaaggacatgat
ggtgaagaagttactgaaactcaagatttcaccaaagtcttcattgggaaggttcctata
atgcttcggtcgagttattgcacattgtaccagaattcagagaaagatcttacggagctt
ggggagtgtccttatgatcagggtggatatttcattatcaatggaagtgaaaaagttctg
attgctcaggagaagatgagcaccaatcatgtttatgtgttcaagaagaggcagccaaac
aagtatgcatatgttgccgaagttcggtccatggcagagtctcagaaccggccacctagt
accatgtttgtgcggatgctatcccggactagtgccaaggggggctcttcagggcagtac
attcgagctacacttccctatattcgaactgaaattccaattattattgtgtttcgtgct
ctggggtttgttgctgacaaagacatattagaacacatatgctatgatttctctgatact
caaatgatggagttgcttcggccttctcttgaagaagcatttgtgattcaaaatcaacag
gttgcactagattacattggaaagcgtggagcaactgttggtgtaactagggaaaaaagg
ataaaatatgctaaagagatccttcaaaaggaaatgcttcctcatgttggtgttggagaa
tattgtgagaccaaaaaagcttactattttgggtacataattcaccggcttctactttgt
gcacttggccggagggcagaagatgacagggatcattatggcaacaaaagacttgacctt
gctggtcctttacttggtggactctttagaatgttattcagaaagttgactagggacgtc
agatcttatgtgcaaaagtgtgtagataatggaaaggatgttaatctgcaatttgccatt
aaagcaaaaaccattactagtggtcttaaatactcgctagccactggtaactgggggcaa
gcaaatgcagctggtacaagagctggagtgtcacaggtgttaaatcgtttgacatatgca
tctaccttgtcacacttacgaagattgaattctccaattgggcgtgaagggaaattggct
aaacctaggcagttgcataattcacaatggggaatgatgtgtccagctgaaacacctgaa
ggacaagcttgtggactggtgaagaatcttgcattgatggtgtacataactgttggatct
gctgcgtatcctatcttggaatttttggaggaatggggtactgagaattttgaggaaata
tctcctgcagttattcctcaagctacaaaaatttttgttaatggttgctgggtaggcatc
catcgtaatcctgatatgttggtcaagacattgagacggctgaggagacgggttgatgtc
aacactgaagttggggtcgttagagatattcgtttgaaagagctgcgaatatacacagac
tatggccgttgcagtcgtcctttgttcattgttgagaaacaaaggcttcttatcaagaag
aaggacattcatgctctgcagcagagggaatcctcagaagagggtggttggcatgatctt
gtggcaaaaggatttattgaatatattgacacagaggaagaagagaccactatgatatcc
atgaccattcatgatctcgtacaagcaaggctcaacccagaggaagcttatgccgatact
tacacccactgtgagatccacccgtcgctgattttaggtgtttgtgcttcaattattcct
tttcctgatcataaccagtccccacgtaacacgtatcaatctgctatgggaaagcaagcc
atgggaatatatgtcactaactatcaatttcgaatggatactttggcttatgttctttat
tatcctcaaaaaccacttgttactacaagagctatggaacacctacactttaggcagctt
ccagctggcattaatgctattgttgccattgcctgctattctggatacaaccaagaagat
tctgtcattatgaaccaatcatcaattgaccgtggattcttcagatcacttttcttccgt
tcatacagagatgaggagaaaaagatggggacacttgtcaaagaggattttgggcgtcct
gacagagctaatacaatgggcatgcgtcatggctcttatgataaattggatgatgatggt
cttgcacctccaggtacaagagtttcaggtgaggatgtgatcattggaaagaccactcct
atttctcaggatgaagctcagggacagtctgcacgttatacaaggcgtgatcacagcata
agcttgcgccacagtgaaacgggaatagtggatcaagttcttctgacaacaaatgctgat
gggttgaggtttgttaaagtaagggtgaggtctgttcgcatacctcagattggagacaag
tttagcagtaggcatggtcaaaagggaacagtgggcatgacttacactcaagaagacatg
ccttggactgtggaaggcatcacccctgatatcattgtgaatccgcatgctattccttct
cgaatgacgattggtcagcttatcgaatgtatcatgggaaaggttgcagctcacatgggc
aaggaaggggatgctactccatttactgatgtcactgtggacaacattagcagggctctt
cataaatgtgggtatcaaatgcgtgggtttgagactatgtataatggtcacactggccga
cggcttaccgctatgattttccttggccctacttattaccaaaggctgaagcacatggtt
gatgacaagatccattcacgtggaagaggccctgtgcagatcctcacaaggcagcctgct
gaagggcgttcacgtgatggtggcctccgctttggggaaatggaacgagattgcatgata
gcacatggtgctgcacactttctcaaagagaggttgtttgatcagagtgatgcctatagg
gtccatgtttgcgagcggtgtggcttgattgctattgcaaatctcaagaagaattctttt
gaatgcagaggttgcaagaataagactgacattgttcaggtgcatattccttatgcctgt
aagctgctcttccaagagcttatggcgatggccatagcaccaaggatgctcacaaaagat
gtgaaaccatccaaagacaaaaagaaaaaaggagcctaa
DBGET
integrated database retrieval system
