Hevea brasiliensis (rubber tree): 110666916
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Entry
110666916 CDS
T05150
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110666916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110666916
Enzymes [BR:
hbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110666916
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110666916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_polI_A14
Motif
Other DBs
NCBI-GeneID:
110666916
NCBI-ProteinID:
XP_021683277
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MANKKERSGAAMGDYRELQELARHHIDSFDYMVDRGLEIMLDNIKPVKISDSITNTSLKL
YLSNPRIYEPLKESSRTKHKRLLPFECRQAKTSYTGKFEADVCFEYHGRAVIREKYNFGQ
FPIMLRSKLCHLYGVDSRKLVSFKEESSEMGGYFILNGLERVVRLLIMPKRNYPMSMVRG
SFRDRREGYTDQAVVIRCVRENQSSLSDQSSITVKLYYLRSGSARLGFWIQGREYLLPVG
IVLKALTETTELEIYEKLTCCYNEKCEKAKGAVGSQLVSARAMIILDEVRELSLFTQADC
LRHIGEHFQPVMDGMERENFSNVAHAVLRDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQT
SVPDNPDSLQNQEVLLPGHLITIYLKEKLEEWLRKTKKVIQDEMAKNNNFNFLSVSDVKR
IMDRNPSTAISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA
SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDM
RKSILGVLTGLGMTSSLPKLVQAGPPQVLYVLLDGRLVGSIPSGEVEKVVTHLRRLKVSA
ASVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPTEDSQNIELIGPFEQVF
MEIRCPDGGNGGRSDAFPATHEEIHPIDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMA
FSLQSLRFRADQKLYHLQTPQTPIVRTSSYTKYCIDEYPTGTNAIVAVLAYTGYDMEDAM
ILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRDQRMFRRSNIDKSLQSVIDSDGLPYVG
QIIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAVDTKNKKHLQKVNIRFRHPRNPI
IGDKFSSRHGQKGVCSQLWPDIDMPFSGLTGMRPDLIINPHAFPSRMTIAMLLESLAAKG
GSLNGKFVDATPFASSVKKANGGETKSESESLVDDLGEMLRSHGFNYHGVEVLYSGVYGT
ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAML
AHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQQQKRVVRDIGGLPPVRAPKKVAC
HACQTSKGMETVAMPYVFRYLAAELAAMNIKMTVRLKDGA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagaaggaaaggtcaggcgcagcaatgggggactacagagagttgcaggag
ctcgccaggcaccacatagattcgttcgattatatggttgatcgaggattggaaattatg
ctggataatatcaagcctgtgaaaatttctgattctatcaccaatacaagtctcaaattg
tatttgagtaatccaagaatatacgagcctctaaaggaaagttcgaggacgaagcacaaa
cgtttacttccgtttgaatgtcgtcaggcgaagacttcatacactggaaagtttgaggca
gatgtttgcttcgagtatcatggcagagcggttataagggagaagtataatttcgggcag
tttcctataatgttaaggtcaaagctttgtcacttgtatggtgttgattcccgaaaactg
gtttccttcaaggaagaatcatcagagatgggtggctacttcattttgaatgggctggag
agagttgttcgacttctaataatgccgaagcggaactatccaatgagtatggttcgagga
tcatttcgtgatcggcgggaaggatacactgatcaggcagttgttataaggtgtgtacga
gaaaatcaatcttccctatcggatcaatcttcaataacagttaaattgtattaccttcgt
agtggaagtgcaagacttggattttggatacaaggaagggagtatttgcttcctgttggc
attgttctgaaggcacttactgagactacagagctagaaatttacgagaagttgacatgt
tgttataatgagaaatgtgagaaggcaaagggagctgttggttctcagcttgtgagtgca
agggcaatgattattcttgatgaagtccgggaattgtctcttttcactcaggctgattgt
ctacggcatattggagaacacttccaacctgtcatggacgggatggagagagaaaatttc
tctaacgtggcccatgcagttctaagagattacatatttgtacatcttaataattatgat
gacaagttcaatctgctcatcttcatgttgcagaaacttttctcccttgtagaccagact
tctgtgcctgacaatccagattccttgcaaaatcaggaagtgttacttcctgggcacctt
attaccatttatctcaaggaaaaactagaagagtggcttcgtaaaaccaagaaggttatt
caagatgagatggcaaaaaacaacaattttaattttttgtcagtttcagatgtcaagagg
atcatggatagaaatccatcaacagcaatcagtttagctgtggaaaatatgctgaaaacc
ggaagacttgtaacacaaactggcctagacttacagcagagagctggttacacagttcaa
gcagagaggctcaattttctacgttttctttcctttttccgggctgtgcatcgaggggct
tcgtttgctggactgcgcacaacaagtgtgcggaaattgctacctgaatcttggggtttt
ctttgccctgtccatacacctgatggtgagccatgtgggttgctgaaccatatgactcgt
tcttgtcgaattacttcatactttgattcacaaggagctgttaaagacttttttgatatg
aggaagtcgatccttggtgttttgactggtcttggaatgacttcttcattgccaaagctt
gttcaagctggccctccgcaagttctttatgttcttttagatggtcgtcttgttggctcg
ataccttctggtgaggttgagaaagttgttactcacttgcgaagattaaaagtgtcggct
gcttcagtgattcctgatgatctggaggtcggatatgttccattgagcatgggtggtgca
tatcctggtttatacctcttcacatctccttccagatttattcgtccagttagaaatatt
tctatccccactgaggacagtcaaaacattgaacttataggaccgtttgaacaggttttt
atggaaataagatgtccagatggtggaaatggcggtagaagtgatgcttttcctgcaact
cacgaagaaattcatccaattgatatgctcagtgtggtggctaaccttacaccttggtct
gatcacaatcaaagcccacgaaatatgtaccagtgtcagatggcaaaacaaacaatggct
ttctctttacaatctcttcgcttccgtgcagatcagaagctatatcatcttcagacccct
caaactcctattgtgcgcacaagttcatatacaaagtactgcatagatgagtatccaaca
gggacaaatgcaatagttgcagtgcttgcttatacaggatatgatatggaggatgccatg
attctgaataagtcatctgttgaacgtggtatgtgccatggacaaatttaccagacagag
accattgacttatctgaagaaggtagcaggtctgatagagaccaaagaatgtttaggagg
agtaacattgataagtcattgcaatctgtgattgattcagatggacttccatatgttggt
cagataatacatccaaatgaaccctactgtagcatttataatgagataacaaatacaaca
agaaccaacaaccgaaaaggttcagaccctgttattgttgattatgttgctgttgatacc
aaaaacaagaagcatcttcagaaggtgaatatacgttttcgacatcccagaaaccctatc
attggtgataaatttagtagtagacatggacagaagggtgtttgctcccaattgtggcca
gacattgatatgccattttctggactcactggaatgcgtcctgatctgattatcaatcct
cacgcatttccttcaagaatgacaattgcaatgcttttggaatctcttgctgctaaggga
ggtagtttaaatggaaaatttgttgatgctacaccttttgctagttcagttaaaaaagct
aatgggggagaaaccaaatcagaatctgaatcgcttgttgatgatcttggtgaaatgcta
agatctcatggttttaactatcatggtgtggaggtgctatatagtggggtttatggaaca
gaactcacatgtgaaatatttattgggcctgtttattatcagcgccttcgccacatggtt
tcagacaaatttcaggtgcggtcaactggaactgttgaccagattactagacagcctatt
aaaggaagaaagcgtggtggaggtatacgttttggagaaatggaacgagatgccatgctt
gctcatggggcagcatatttattgcatgataggcttcacacatgttctgattatcacatt
gctgatgtatgttctctatgcggaagcatactcacaacatcatttatccagcaacaaaag
cgggtagtgcgggatatcggtggattacccccagtgagggctccaaaaaaggtggcatgt
catgcatgccaaacaagtaaagggatggaaactgttgccatgccttatgtatttagatat
ttggctgccgaattagcagcgatgaacataaaaatgactgtccggctaaaagatggtgct
tga
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