Hemicordylus capensis (graceful crag lizard): 128323030
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Entry
128323030 CDS
T08891
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcg03016
]
128323030 (CDKAL1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
128323030 (CDKAL1)
Transfer RNA biogenesis [BR:
hcg03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
128323030 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
128323030
NCBI-ProteinID:
XP_053101495
LinkDB
All DBs
Position
4:218293604..218713092
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AA seq
577 aa
AA seq
DB search
MPAVCDSFLDDIEDIVSAQDPKPHDRQFRKESIIPKVRKRNSQKNVEADEDPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKIAENAAEADLWLLNSCTVKSPAEDHFRNS
IRKAQEGKKKVVLAGCVPQAQPRQDYLQGLSIIGVQQIDRVVEVVEETIKGHSVRFLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEVIPEGALLRVGMTNPPYILEHL
EEMAKILNHPRVYAFLHVPVQTASDSILMDMKREYCVADFKRVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMNLVGEYKFPSLFINQFYPRPGTPAAKMHQVPAQIKKQRTKELSQ
LFHSYNPYDHKIGERQKVLVTEESFDSKFYVAHNRFYEQVLIPKNPEFMGKMVEVDIYEA
GKHFMKGHPVSDTQVFTPSITKPFAKGEVSGLTEEFRHALKNGSESKACPSAEKQKVPLS
HRMVMRLPWQQGGSVLKILSLSVALLAVLIAFYYGGV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtttgtgattctttccttgatgacattgaagatattgtgtctgcacaagat
ccaaagccacatgaccggcaattcaggaaagagagcattattcctaaagtgcgaaaacgc
aattcacaaaagaatgtagaagcagatgaggatcccccaagtgacagtattattcctggt
gtacaaaaaatctggatacgtacgtggggatgttctcataataattcagatggagaatat
atggctgggcagctggctgcatatggatacaaaattgcagagaatgctgcagaagcagac
ttgtggctgttgaacagctgtactgtaaaaagccctgcagaagaccactttagaaactca
attaggaaagcacaagaaggaaaaaagaaagttgttctagctggatgtgttccccaagcc
cagcctcggcaggactaccttcaaggcctgagcattatcggggttcagcagatagatcgc
gtggtggaagttgttgaggagactatcaaaggtcactctgtgcgatttctgggtcagaaa
aaggataatggaaaacggttagggggagctcgattggatttgccaaagattagaaagaac
ccactgatagaaataatttccatcaatacagggtgtctcaatgcgtgcacctactgcaaa
actaaacatgccagaggggacctggcaagttatcctgttgaagaactggtagacagagcc
aagcagtcttttcaagaaggggtatgcgagatatggctgaccagcgaagacactggggct
tatgggagagacattggcacagaccttcctactctcctgtggaggctggttgaagtgatc
cctgagggagcattgctgagagttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggcaaaaattctcaatcatccaagagtctatgcttttcttcatgtaccggtc
caaactgcctcggatagtatattgatggacatgaagagggaatattgcgtggcagacttt
aaaagggtagttgacttccttaaagaaaaagtgcctggaataacaattgctacagacatt
atttgtgggtttccaggggaaacagatgaagattttcaagaaaccatgaaccttgtagga
gaatacaagtttccgagtctttttattaaccagttttacccacgccctgggactcctgct
gcaaaaatgcatcaagttccagcccaaataaaaaaacaaagaacgaaggaactatcccaa
ttgtttcattcatacaacccatatgatcacaagattggggaaagacagaaagttcttgtt
acagaagaatcatttgattccaagttttacgttgctcataatcgattctacgagcaggtc
ctcatcccaaagaaccctgaattcatgggtaaaatggtagaagtggacatttatgaagca
gggaagcactttatgaagggacacccagtttcagatactcaagtgttcacgccatctatc
accaagccattcgccaaaggagaggtttctggtttaacagaggagttcagacatgcactg
aagaatggctcagaatcaaaagcttgtccatctgctgagaagcaaaaagtaccattgagc
cacaggatggtgatgcggttaccttggcaacaggggggaagtgtactgaagatcctgtca
ctaagcgtggctctcctggcagttcttattgccttttactatggaggtgtttaa
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