Hemicordylus capensis (graceful crag lizard): 128325268
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Entry
128325268 CDS
T08891
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128325268 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128325268 (TPR)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128325268 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
128325268
NCBI-ProteinID:
XP_053106843
LinkDB
All DBs
Position
4:148562664..148665545
Genome browser
AA seq
2396 aa
AA seq
DB search
MAAVLQQVLERTEIAKLPKAVQGKLERFLADQQSEIDGLRSRHERYKVDSEQQYFEVEKR
LAQSQERLVNETQECQNLRQELTKLNEQLKSLTDKNKELETAQDHNAAIQSQLTRAKEEL
EAEKRDLVRTSERRAQELEYLNDDVKRLNEKLVETNNAKIELQLKLDELQTSAFSVKYRE
QRWEQEKELLQNQNTWLNKELKAKTDELLVLARDKGNEMLELKCNLENKKEEVSRLEEQV
SGLKQSNENLQKHVEDLLGKLKEAKEQQSSMEERFHNELNAHIKLSNLYKSAADDLETKS
NELTQAVEELHKLLKEAGEANKATRDRLAEVEQLKAAMEKELKETISKLEKELDNANDLV
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVEAQDQLLLEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEYERSQKAVASLSAKLEQAMKEIHRLQEDADKANKRAS
VLEREHQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGEAKEKEEQEATSLKISGLQKQLDEAINELDKLREARQHQ
MQLVDSIVRQRDMYRILLAQTTGVTIPLQVTSIMPEEVSLTSTPKRMSGTPQAMSTPASV
AVTESVEAVEAKAALKQLQDVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNTKISTQ
LEFASKRYEMLQDNVDGYRREITSLHERIQKLTATTQKQEQIINTLTQELRGANEKLAVA
EVRAENLKKEKDIFKMAEVRLTQQKESLVAEQRGQNLLLTNLQSIQVILERSETETKHRL
NNQIERAEREIAQLKKKLENEVEQRHALSKNQDIHLLDTKRQLETEMSLHVNTKELLKNA
QKETAALKQQLHNMEAQLASQSLQRAPGQGQPSTSEDVDDLVSRLRQYEEQVIDLKERLK
TTTSNVEQYRAMVVSLEESLNKEKQVTEEVRVAVEARLKESTEYQSQLEKKLMEAEKEKQ
ELQDEKRKVVENMEQQLSELKQSLSSMKSEVQEALQRASVALTNEQQAKRDCQEQAKIAA
EAQNKYERELMLHASDVEALQAAKDQVAKNSAVKQQLEETAQKAESALRESKASWEERER
MLKDETSKLASRCEDLEKQNRLLLEQLETLSDKMMSAMKEGTPSALNVSLNEEGKSQEQI
MEILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQESLNAEREKVQVTAKTI
AQHEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSE
KSGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDVEEYRKLLSEKEVNTKRIQQMSEEIG
RLKAENARSNASLTTSQNLVQTLREDLTKIKAEKEGLQKELDVKVADIQDKVRTITQVKK
IGRRYKTQYEELKAQHDKVVAEASTRSSVEEQEQRASDKDVQEAKEALSQAEAKIKTLEG
QIENLQKTLGEKETEIKNLQEQVAQLQSEVSRLHQDLQEKTAQEEQLRQQVAEKEEKTKK
TLLAAKQRIAQLAGTKEQLTKENEEWKQKSSALEEQKTELEVRMSALKSQYEGRICRLER
ELREQQERHHEQRDEPPESTNKAPEQQRQITLKSTPAAGDRGIASTSDPPTANIKPTPVV
STPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPV
EHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPAAQEPSP
TILEVVQSSQPERPSTSTAVFGTVSATPSSSLPKRPREEEDDSTVENSEQIPEEMVDMPV
TKKMRSVQRVGPEEEVTAEESTDGELEAQTCNQDSQDSIGEGVTQGEYTPMEDSEETSQS
LPIDLGHLQSSDQQNTSSSQDGQGKRDDVIVIDSDDEEEEEEENDGEPEYEDEEEDDEDD
DDEDTGMGDEGEDSNEGTGSVDGNDAYEADDAEGADGMDPGTETEESNVGGESSQRAADS
QNCGEGSAGAAESTFSQESPREQQPTSASERQTPRPPRPHPLPPRLTIHAVPAPPQELGP
PVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSP
QVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPL
QVAAPVSVFTESTTADASEHASQSVPMVTTSTGNLSTTSESGTGDDGDEVFVEAESEGIS
SEVGLEIDSQQEEETSQTPDESDLPSTSQDPPSSSSAVRRCSCFLHCHFCVHAYSLKRGI
HCELLSIGREKDIHLIQEMEIKGAQIDLWSLKGLNTRTQAVITPSLSVGSGFSHQP
NT seq
7191 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgctgcagcaggtcctggagcggaccgaaatcgccaagttgcccaaagcc
gtgcaggggaagctggagcggttcttggctgatcagcagagcgagatcgacgggctccgc
tccagacatgagcggtataaggtggacagcgagcaacaatacttcgaagttgaaaaacga
ctggctcagagtcaggagagacttgtaaatgagactcaggaatgtcagaatctccgtcag
gaactaaccaagcttaatgagcagctgaagtcactgacggacaaaaacaaagaactggaa
actgctcaggatcataatgcagctatacagagtcagcttactagagcaaaagaagaattg
gaagcagaaaagagagatttggtccgaacaagtgaaagaagagctcaagagcttgagtac
ttgaatgatgatgttaagcgtctaaatgagaaacttgtagaaacaaacaatgcaaagata
gagctacagttgaaactggacgaacttcaaacgtcggccttctctgtaaagtatcgtgag
caaaggtgggagcaagaaaaggaattgttacaaaaccagaacacttggctgaataaagaa
ctgaaggcaaaaacagatgaactcctagttcttgccagggacaaagggaatgaaatgttg
gaacttaaatgtaacctggagaacaagaaagaggaggtctccagactggaggaacaagtc
agtggactaaaacaatccaatgaaaatctacagaaacatgtggaagatctcttagggaaa
ctgaaggaggcaaaagagcagcaatccagtatggaggagagattccacaacgagctaaat
gcccatataaagttatctaatttatacaagagtgctgctgatgacctggagacaaagagc
aatgagctgacacaagctgttgaggagctgcacaaacttctgaaagaagcaggtgaagct
aacaaagcgacacgggatcgtttggctgaggtggaacaattgaaggccgcaatggaaaaa
gaactgaaagaaacgattagcaagctggaaaaagagctggacaatgcaaacgatttggtt
tctgccaccaaacgtaaaggggccatcctttcagaggaggagctggcagcgatgtctcct
acagctgcagcagtagctaaggtggtaaagcctggcatgaaattaacggagctttacaat
gcatatgtagaagctcaggatcagctgctgcttgaaaagctagagaataagagaattaat
aagtacttggatgaaatagtgcaagaagtagaagccaaagcacctattttgaagcgccag
cgtgaagaatatgaacgctcacaaaaggctgtcgcaagtctttctgctaaacttgagcaa
gctatgaaagaaattcaccgcttgcaagaagatgctgataaagcaaacaagcgagcttct
gtgctagaaagagagcatcagaggcttgaaatccaagttaaggatctttctcagcagata
agagtgcttttgatggaacttgaagaagccagaggcaatcatgtcattcgtgatgaagaa
gtgagctctgctgacatcagcagctcttctgaagtaataagccagcacctagtctcctac
agaaacattgaagaacttcagcagcaaaatcagcgcctcttggtagctcttcgagagttg
ggtgaagctaaagagaaagaagagcaagaagccacctccttaaagatttctggactacag
aagcaacttgatgaagcgatcaatgagctagataagttgcgtgaagcaaggcagcaccag
atgcagcttgtggactccattgttcgtcagcgtgacatgtaccgcatcttgctggcacag
accactggagttaccattccattacaagtcacaagcatcatgccagaggaagtgtctttg
acgtcaacccctaagcgcatgtcaggtacacctcaggccatgtcaacaccagcttctgta
gcagtgactgagtcggttgaagcagtggaggcaaaggctgctcttaagcagttgcaggac
gtatttgagaactacaagaaagaaaaagcagagaatgacaaactgcttaatgagcaaaat
gagaagcttcaagaacaggttacagacctgaggtcacagaatacaaagatttctactcaa
ctcgaatttgcctctaaacgttatgaaatgctacaggataatgttgatggatatcggcga
gaaataacctcattgcatgaaagaatccagaagctcacagcaaccactcaaaaacaagaa
cagatcatcaataccctgactcaagagctaagaggagccaatgaaaagctagctgtggcc
gaggtgagagcagaaaatttgaaaaaagaaaaggatatttttaaaatggcagaagttcgt
ctgactcagcaaaaggaatcattagtagcggaacaaaggggacagaatctgctacttact
aacctccagtctattcaggtgatattggaaaggtctgagacagaaactaaacataggctc
aataaccaaattgagagagcagagcgtgaaatagcccagttgaagaaaaaactggaaaat
gaggtggaacaaaggcatgcactgtccaaaaatcaggatattcatttattggatactaaa
agacaacttgagactgaaatgagtcttcatgttaatacaaaagaacttctaaagaatgcc
caaaaggagactgcagcattgaaacagcagcttcataacatggaggctcagttagcctcc
cagtcattgcagcgagctcctggccaaggccagccaagcacaagtgaggatgtggatgat
cttgtaagccgactgagacagtatgaagagcaagttattgatttgaaggaaaggctgaag
accaccacaagtaatgtggagcagtaccgtgctatggttgtgagccttgaagaatccctt
aacaaagaaaaacaggtgaccgaggaagttcgtgtagctgttgaagcccgcttaaaggag
tctactgaataccagtcccagcttgaaaagaaactgatggaggctgagaaggaaaaacag
gagcttcaggatgagaaacgtaaagttgtagagaacatggaacaacagctttctgagctg
aagcaaagcctttccagtatgaagtctgaagtccaggaagctcttcagagagcaagtgta
gctcttactaatgagcagcaagccaaacgggactgtcaagaacaagctaagatcgctgca
gaagcacaaaataaatatgaacgagagctgatgcttcatgcttctgatgtggaagcctta
caggctgccaaagatcaagttgctaaaaactccgcagtaaagcagcaattggaagaaaca
gcccagaaagcagaatctgcattgcgagagagcaaagcctcatgggaggagcgagagagg
atgttaaaggatgaaacctctaagcttgcgtctcgctgtgaagacttagaaaaacaaaac
cggctgttgcttgagcagctggaaactctaagtgacaagatgatgtctgcaatgaaggaa
ggaacaccaagtgcattaaatgtgtctctcaatgaggaaggaaaatcacaagagcaaata
atggagattctcaggtttatacgccgagagaaggagattgcagaaactaggtttgaggta
gctcaggtagagagcttacgctaccgtcagagagtggagcatttggaaagggagcttcaa
gagcttcaggagagtttgaatgcagagagagagaaggttcaggtaacagcaaaaacaatt
gcacagcatgaagagctaatgaagaagactgagaccatgaatgtgttgatagaaaccaac
aagatgctgagggaagagaaagagaggctggaacaggagctgcaacaaatgcaagcaaag
gtgcgtaagctggaagcagatatcttgcctttgcaagagtctaacgctgagctcagtgag
aagagtgggatgctccaggcagagaaaaagctgttggaagaggatgtcaagcgctggaag
gcccggactcagcatttattgagccaacaaaaagatacagatgttgaagaatatcggaag
cttctttcagagaaggaagtgaacaccaaacgtatacagcagatgagtgaagaaataggc
agacttaaagcagaaaatgcaaggtcaaatgcatcgctgactacaagccagaatctggtc
cagacactccgagaagaccttacaaaaataaaagctgagaaggaaggacttcagaaagag
ttagacgtgaaagttgctgacatccaagataaagttagaaccataacacaagtcaagaaa
attggacgcagatacaagactcagtatgaagagctgaaagcacagcatgacaaggtggtt
gcggaggcatcaactcgatcttctgtggaagaacaagagcagcgtgcttcagacaaggac
gttcaagaggcgaaggaggctctgtcccaagctgaggcaaagataaaaaccctagaagga
cagattgaaaatttacaaaagactctaggagagaaggaaactgaaataaaaaatcttcag
gaacaggtagcccagctgcagtcagaggtttctcgcctccatcaagatttgcaggaaaaa
acagcacaggaagaacaactcaggcagcaggttgctgaaaaggaggaaaagactaagaag
acccttctggctgctaagcagaggattgcacagttagcagggacaaaagaacaactcact
aaagaaaatgaggagtggaaacagaagagcagtgcactggaagagcagaagactgagtta
gaagtgcggatgagtgcacttaaatctcagtacgaaggccgtatttgccgccttgagaga
gagcttcgagagcagcaagagaggcaccatgaacagcgagatgagcctccagaatctacc
aataaggctccagaacagcagagacagatcacccttaaatcaactcctgctgcaggtgac
agaggaattgctagtacttcagatccgccaactgccaacatcaaaccgacgcctgttgtg
tctaccccaagcaaagtgacagctgctgcaatagctgggaacaaatctactccaagagcc
agtatccgtccaatggtcactcctgctacagtaacaaatcctacaactacgccaacagcc
acagtcatgccaacaacacaggtggaaactcaggaagccatgcagtcagaaggaccagtt
gaacatgttccagtctttggaagcacgagtggatctgtgcgctccacaagccccaatgtt
cagacatctctctcccagcccatcttgactgtacagcagcaaactcaagctacagctttt
gtacagcccactcaacagagccatcctcagatagaaccagctgctcaagaaccctcccca
actattttggaggttgtacagagctcacagcctgaaagaccttctacatcaacagcggtt
tttggcacagtttcagcaacaccaagttcgtctttacccaaacgtccacgggaggaagaa
gatgatagcacagtagaaaattcagaacaaattccagaagaaatggttgatatgcctgtt
acaaagaaaatgagaagtgtgcagagagttggaccagaggaggaggtaactgcagaagag
agcacagatggagaactagaagctcaaacttgcaatcaggattcacaggattctattgga
gaaggtgttacacagggggaatatactcccatggaagatagtgaagaaacttctcagtcc
ctcccaatcgatctgggacatcttcagtcatcagatcaacagaacacatcatcctcccag
gatggtcagggcaagagagatgatgtcatcgtcattgacagtgatgatgaagaggaggaa
gaggaggaaaatgacggagaaccagaatatgaagatgaggaagaggatgatgaagatgac
gatgatgaagacacaggaatgggtgatgaaggtgaagatagtaatgagggcactgggagt
gttgatggtaatgacgcatatgaagcagacgatgctgagggtgctgatggaatggatcct
ggtacagaaacagaagagagcaatgttgggggtgaaagcagccagagagcagctgactct
caaaactgtggtgaagggagtgcaggtgcagcagagtctaccttctctcaggaaagccct
agagagcagcagccaacatctgcttcagagagacagacaccacgtccacctcgaccccat
ccattaccgccacgactcactattcacgctgttcctgctccaccacaggaactgggacca
ccagtacagagaattcaaatgacgcgacggcagtcagtgggccgtggccttcagctaacc
cctggcataggtggcatgcagcagcacttttttgatgatgaggacaggacagtgcctagc
actccgacattggtggtaccccatcgtacagatggatttgcagaagcaattcactcccct
caggttgctggagttcctagattcaggtttgggcctcctgaagacatgccacagaccagt
tccagccactcggatcttggccagcttgcatcgcaaggaggattgggaatgtatgaaact
ccgctcttccttgctcatgaagaggaatcaggaggccgtagtgttccaacaactccgctt
caggttgcagcacctgtatctgtgtttactgaaagcaccactgctgatgcttcagaacat
gcttctcagtctgtcccaatggttacaacatctactggtaacttatcaaccacttcagaa
tctggaacaggtgatgatggtgatgaggtatttgtggaggcagaatcggaaggaatttct
tcagaggttggtctagaaattgatagccagcaggaagaagagacctctcaaactcctgat
gagtcagaccttccttctaccagtcaagatcctccttctagctcatctgcagttagaaga
tgttcatgttttcttcactgccacttttgtgtgcacgcttattcgttgaagagagggatt
cactgtgaactgctcagtatagggagggagaaggacattcacctgatccaagagatggaa
atcaagggggcccagatagatctttggagtctaaaaggtctaaacaccaggacacaagca
gtaatcaccccaagcctttccgtcgggtcaggcttcagccaccaaccttaa
DBGET
integrated database retrieval system
