Hemicordylus capensis (graceful crag lizard): 128326718
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Entry
128326718 CDS
T08891
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128326718 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128326718 (CLP1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
128326718 (CLP1)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
128326718 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
ATP_bind_1
AAA_22
TniB
AAA_16
AAA_18
CbiA
Motif
Other DBs
NCBI-GeneID:
128326718
NCBI-ProteinID:
XP_053110075
LinkDB
All DBs
Position
1:complement(143454545..143483798)
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AA seq
431 aa
AA seq
DB search
MCKGNKMADEAGDENKLLAKFELERETELRFEVEASQTVQLELMKGMAEIFGTELTRNKK
FTFDAGAKVAVFTWHGCSVQLTGRTEVAYVSKDTPMLLYLNTHTALEQMRWQAEREDERG
PRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADV
EEGFSVQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWV
KGSGYQALVHAASAFEVDVVIVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRR
EFRDERIREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVP
VTPGRDMVHHLLSVSTADGTDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFL
LIMDIRFMDLK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaagggaaacaaaatggcagatgaagctggggatgaaaacaaattgttggccaag
tttgagctggagagggaaacggagctccgctttgaggttgaagcctcacaaactgttcaa
ctggagcttatgaaaggcatggctgagatctttggaactgagctgacacgcaacaagaag
ttcaccttcgatgctggtgctaaagtggctgtcttcacatggcatggttgttcggtgcag
ctgactggccggactgaggtggcttatgtctccaaagacacccctatgcttctgtacctc
aacacacatactgcactggagcagatgcggtggcaggcagaacgtgaagatgaacgggga
cctcgggttatggtggtgggccccacagatgtaggcaagtcaactgtttgccgcttgctg
ctgaattatgctgttcgcttagggcgccgacccacttttgttgaactggatgtaggccag
ggctcaatctctattccgggcactatgggggcactctacattgaacggcctgcagatgtt
gaagaaggcttctcagttcaggcccccctggtctatcactttgggtccaccactcctgga
acaaacatcaaactctataacaagatcacatctcgcttggctgatgtctttaaccagcgc
tgcgaagtgaaccgccgtgcttcagtcagtggctgtgtcatcaatacctgtggctgggtg
aaggggtctgggtaccaggcactggtacatgctgcctcagcctttgaggttgatgttgtt
atagtgttggaccaagagcgcctctacaatgaactgaagcgagacttgccccactttgtt
cggacagtgctacttcccaagtcaggtggagtggttgagcgctccaaggacttccggcgg
gagtttcgtgatgaacgcatacgtgaatatttctatggctttcgaggatgcttctaccca
catgcctttgatgtcaaattctctgatgtcaagatatataaggtgggagcccccaccatc
cctgactcatgtctgcctctgggcatgtcacaagaagataaccagctcaagctggtacca
gttacacctggccgtgacatggtgcaccacctgctaagtgttagtactgctgatggcact
gatgagaatatctctgagactagtgtagctggtttcattgtagtcactggggtggatctg
gagcgccaggtcttcacagtactatctccagcacctcgcccattgccaaagaacttccta
ctcatcatggacattcgtttcatggatctcaagtag
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