Hemicordylus capensis (graceful crag lizard): 128347072
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Entry
128347072 CDS
T08891
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04510
Focal adhesion
hcg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128347072
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128347072
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
F5_F8_type_C
HSBP1
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
128347072
NCBI-ProteinID:
XP_053157115
LinkDB
All DBs
Position
2:266631946..266714496
Genome browser
AA seq
1837 aa
AA seq
DB search
MNLSTLPMALLLNLLLWVQTADAQGPEEPDLLYHGCSEGSCYPATGNLLIGRTQSLRATS
TCGLEGPQEYCIVSHLQDSEKCFTCDSRSPSLRESHLIENVLYLGGQDGEQTWWQSENGV
EQVSIRLDLEAEFHFTHLIMKFKTFRPAAMLIERSSDFGHSWKVYRYFAFNCSKLFPGIP
THVPTHVNQAVCDQRYSEIEPSSHGEVIFKVLDPAVKVEDPYSREIQDVLRVTNLRVNFT
KLHTLGDNLLDSRHQVLQKYYYAVYEMVLRGSCFCYGHASECAPLAGVPIRIEGMIHGRC
MCKHHTKGLNCELCKDFYQELPWRPAEAHHPHACKECNCNEHSQRCHFDMAVYLATGNTS
GGVCDECQHNTMGRHCQLCKPFYYRNPLADIRASTACIPCDCDPVGSLDGGVCDSHTDAT
LGMIAGQCRCKENVKGVRCDSCKEAFYGLSRNDPLGCQPCRCDPRGIIAGSSPCDHISGD
CYCKRFVTGRYCNQCLPEYWGLSYDMTGCRSCACDFGGAYSNRCSMDDGQCPCQPHLMGR
QCNDVQPGFFCIPLDYYMYEAEHATGLAPTHPGLPGALRPEAPVDCVEYYNGVQNGRKVR
LRRQHSTIRLLQQRAALRRARQLQQKPDVEVVQREHTGHMITWTGPGFARVRDGAGLSFH
IDNIPYPMEYDILLRYEPESTEDWEAVVSVSSQALPMSPRCGNVLPSEQMYRESLPHSSR
YVLLPRPFCFEPRNQYEITVRFQRAGVTQRHPAAFILVDSLVLLPRVTELPGLHGNDPAA
VERQEELERYTCLEAFRMATMPDLAETCASLLCSISALMHEGALPCQCDPQGSISSVCHK
LGGQCQCKPNVMGRRCDQCVPGTYGFGPYGCSPCACSPEGSVSRICEPVSGQCRCQHGSV
GRQCDQCPPGQWGFPNCQPCHCNGHSEECDLHTGVCQQCRDYTAGRHCERCLDGYYGNPV
LGSGQQCRPCPCPGYPGSRHYHGLSCHADRETNQIICLCAPGYTGPRCDCCSPGYFGTPE
QEGGACRPCQCNNNIDTSDPEACDPHSGQCLRCLYNTGGPHCAECQPGYYGNALQRNCRR
CTCNEQGTLLSLCSKGICYCDRTTGNCPCRANVVDKNCDKCAPNFWGFGSDLGCQPCGCD
PAHSLRPDCNMFTGQCHCQPGFGGQVCSHCQEDHWGDPERECLACECDPRGSESLQCDRL
TGDCRCQAGFMGRRCDQCQRGFRQNFPRCSPCHPCFGQWDVVLGQLWEQLQQLQDTVRAL
KEVGPITDPINSRMRKIESKLDDLEQQLGDGSSPSIPLLHQLNTVLEQIRAEMDDLWKQL
QATDSHLDGTEKDAEGQRARLNVLSRELLALNYTVNNLSSKLEGITNGSFSELFLSILGS
FQQSEQTQQRADASVQGPQSPVGQSKHTRKTTVELLTRKGDAFLNSAAAHQKSLRDLQRK
VNSLSLSRISQKICGASGGEDCQQSPCGGASCKDSLGQRHCGGPGCTGALPVSMRALHTA
QNISRQLEATATQLGILAVKVQEIQDLAQGARSLAQETLGRAQGARSRMENSTAMLREFI
QKIKDFLAEEGADPESIELVAQQVLTISLPSSPSQISSLLQEIWDRIGQLDGVDDVLNST
VHNLTRARELLAKAEQAKERAQGVQGTIADTVAALRVAKDKVRAAEKAMKSSKEAIRNVE
SKVRQADRRLQALVDKESQLESRLGELAREVANLREKSQANQQLAQKAKGKAERATATAG
ELQNEMQKVVQRYQKLQEELEKQPDDVLLKLRNLRTEAENLLVKANSSKRKLEELEGLFE
TNEEEMKKKAVHLQQLEKQVMELLQYIRDKATAYAIC
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtctacattgccaatggcactcctgctcaatttgcttctttgggttcagaca
gctgatgctcagggcccagaagagcctgacctgctgtaccatggctgctcagaggggagc
tgctacccagccaccgggaatctgctcattgggaggacccagagcctgagggctacatct
acgtgtggcctggaagggcctcaggagtactgcattgtcagccatctgcaggactctgag
aaatgcttcacttgcgactcgcgctccccatccctgcgtgagagccacctcattgagaat
gtcctctacttgggcgggcaggacggcgaacagacatggtggcagtctgaaaatggtgtg
gaacaggtcagcattcgcctggatctagaagctgaattccactttactcacctcatcatg
aagtttaagacattccgcccagcagccatgctgattgaacgttcgtcagattttgggcac
agctggaaggtttatcgctactttgccttcaactgctccaagcttttccctggcatccct
acccacgtgccaacacatgtcaaccaggcagtgtgtgaccagcgatactccgagattgag
ccctccagccatggcgaggtgattttcaaagtgctagacccagcggtgaaagtagaggac
ccatacagccgggaaatccaagacgtgttacgtgtcaccaacctgcgggtgaacttcaca
aagctgcacactctgggtgacaacctgctggactcgcgacatcaggtgctgcagaagtac
tactatgccgtgtacgagatggtgctgcgtgggagctgcttctgctacgggcatgcctct
gagtgtgcccccctggccggagtgccaatcagaatcgagggcatgatccatggacggtgc
atgtgcaagcaccacaccaagggcctcaactgtgagctctgcaaggacttctaccaggag
ttgccatggagaccggctgaggcccatcatccacatgcctgcaaagagtgcaactgcaac
gagcactcgcagaggtgccacttcgacatggcagtgtacctggccacgggcaacaccagt
ggaggggtctgcgacgagtgtcaacacaacacgatgggccgccactgccagctctgcaag
cccttctactaccgcaacccactggctgacatccgtgccagcactgcttgcatcccctgt
gactgtgacccagtgggctctttggatggtggtgtgtgtgacagtcatacagatgcaaca
ctgggcatgatcgctgggcagtgccgctgcaaggagaatgtcaagggtgtgcgttgtgac
agctgcaaagaggccttctatggactgagccgcaatgaccctctggggtgccagccctgc
aggtgtgaccctcgtgggatcattgcaggtagcagcccctgtgaccacatcagtggtgac
tgctactgcaagcgtttcgttactgggcgatactgcaaccagtgtttgcctgaatattgg
gggctgagctatgacatgactggctgccgaagctgtgcttgtgattttggaggagcctac
agcaacaggtgctccatggatgatgggcaatgcccctgccagccccacctcatgggacgc
caatgcaatgatgtgcagcctgggttcttctgtatacccctggactactacatgtatgaa
gcagagcatgctacgggtcttgccccaacgcatccgggtctgccgggtgccttgaggcct
gaggctcctgttgactgtgtggaatattataatggggtccagaatggccgcaaagtgagg
ctgaggcgccaacacagcacaatcagactcttacagcagcgagcagcgctcagacgagcc
cggcagcttcagcaaaagccagatgtggaggttgtgcagcgggagcacacaggtcacatg
attacatggacgggcccaggctttgcccgcgtacgggatggggctggcttatccttccac
attgacaacattccctaccccatggaatatgatatcttgttgcgctatgagcctgagtct
acagaggactgggaagctgtcgtcagtgtcagctcacaggctttaccaatgagcccacgc
tgtggcaatgtgctaccctcagagcagatgtaccgggagagcctgccgcatagttccagg
tatgtgctcctgccacggcctttctgctttgagcccaggaaccagtatgagatcactgtg
cggttccagcgggcaggtgtgacccagcgccaccctgcagccttcatccttgttgactcg
ctggttcttttgccacgtgtgacagagctgcctggtctccatggtaatgatccagcggca
gtggagcgccaggaagagctggagcgctacacatgcctggaggcattccgcatggccacc
atgcccgacctcgctgagacctgtgccagcctgctgtgcagcatctctgccctgatgcat
gaaggggctctgccttgccagtgtgacccccaaggttccatcagcagcgtctgccataaa
ctgggagggcagtgtcagtgtaaacctaatgtgatgggtcggcgctgtgaccagtgtgtt
ccaggaacctatggatttggaccatatggctgtagtccatgtgcctgttcccccgagggc
tccgtctccaggatctgcgagccagttagtgggcagtgccggtgccagcatggctctgtg
ggacgccagtgtgaccaatgtccaccaggccagtggggcttcccaaactgccagccttgt
cactgcaatgggcactcggaggaatgtgacttgcacacaggagtctgccagcagtgccgt
gattacacagctggccgccactgcgagaggtgcttggatggttactatggaaatcctgtt
ctaggctcagggcaacagtgtcggccctgcccatgtcctgggtatccggggtctcggcat
tatcatggcctttcctgtcatgctgatagggagaccaaccaaattatttgcctgtgtgct
ccaggctatacagggccacgctgtgactgctgctcacctggctattttggaacccctgag
caggaaggtggcgcctgccgcccctgtcagtgcaacaacaacattgacaccagtgacccc
gaggcctgtgacccacatagcggtcaatgcctgcgctgcctctacaatactgggggaccc
cactgtgctgaatgccagcctggttactatggcaacgccctccagcgtaattgccgacgc
tgtacctgtaatgagcagggcactctgctctcactctgctccaaaggcatctgctactgt
gatcgaacgacaggcaattgcccctgccgtgccaatgtggtagacaagaactgtgacaaa
tgtgcccccaacttctggggctttggcagtgatttggggtgtcagccatgtggttgtgat
cctgcccactcattacggccagactgcaacatgttcacagggcaatgccactgccagcca
ggctttggaggacaagtttgctctcactgccaagaagatcactggggagacccggaacgg
gaatgcctagcttgtgagtgtgacccaagagggtcggagagcctgcagtgtgaccgcctc
actggagactgtcggtgccaggctggcttcatggggagacgctgcgaccagtgccagcgt
ggcttccggcagaactttccccgctgctctccctgccacccttgcttcggccagtgggac
gtggtgctggggcagctctgggaacagctgcagcaactgcaggacaccgtacgggccttg
aaggaagttggccccataactgatcccatcaacagccgcatgcgcaagatcgagagcaaa
ctcgatgatctagagcagcagcttggggatggtagtagtccaagcatccctctgctgcac
caacttaacacagtcctcgagcaaatcagggcagagatggatgacctgtggaaacaactg
caggccactgattcacatctggatggcactgagaaagatgctgaaggacagagggcccgc
ttgaatgtgctgagtcgagagctattggcgctaaactacactgtcaacaacctaagcagc
aagttggaggggataacaaatggcagcttcagtgagttattcctgagcattctggggtcc
ttccagcagtcagagcagacccagcagcgagcagatgcctctgttcaagggccgcaaagt
ccggtgggccagtccaagcacacccgtaagaccacggtggaattgctgacacgcaaggga
gacgcctttcttaatagtgcagcagctcaccaaaaatcactgcgtgacctccagagaaag
gtcaacagcctcagccttagcaggatcagccagaaaatttgtggtgcttctggaggtgag
gactgccagcaatccccctgcggaggggcctcctgtaaggacagcctgggccaacggcac
tgtggaggccctggctgcactggagcactgcctgtgtccatgagagcactgcatacagcc
cagaacatctcccgccagttggaggccacagccacgcagctgggcatccttgctgtcaag
gtacaggaaatccaggacctggcacagggtgcccggagccttgcccaggagaccctgggc
cgtgctcaaggagcccggagccgcatggagaattcaacagccatgctgagggaattcatc
cagaagataaaggacttcctagcagaggaaggtgctgaccccgagagcattgagcttgtg
gcccagcaagtactgaccatctctctgcccagcagccctagtcagatcagcagcctgctt
caggagatctgggacagaattggccaactggatggagtggatgatgttctgaacagcacg
gtgcacaacctgactcgtgccagggaactactggcaaaagcagaacaggcgaaagagcga
gcacaaggtgtacagggaaccattgcagacacagttgcagcgttacgtgttgcaaaggac
aaagtgagggctgctgagaaagcaatgaagagctctaaagaggccatccggaatgtggaa
agcaaagtcagacaggctgatcgtcggctccaggcactagttgacaaggaatcgcaactg
gaaagtcgtcttggagagctggcacgggaggtggccaatttacgagaaaagtctcaggcc
aatcagcaactggcccagaaggccaaggggaaagcagagcgtgctactgccactgcagga
gagctgcaaaatgagatgcagaaagtggtgcagagataccagaagctgcaggaggaattg
gaaaagcagcctgatgatgtactgctcaagctgagaaacctgaggactgaagctgagaat
ctcctagtcaaggccaatagcagcaagagaaaattagaagaattggaggggctctttgag
accaacgaggaggaaatgaaaaaaaaagcagtgcatctgcaacaactggagaagcaggtg
atggaactactgcaatatatccgggataaagccactgcctatgccatctgctag
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