Hemicordylus capensis (graceful crag lizard): 128350028
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Entry
128350028 CDS
T08891
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03020
RNA polymerase
hcg04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128350028 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
128350028 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128350028 (POLR3A)
Enzymes [BR:
hcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128350028 (POLR3A)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
128350028 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
128350028
NCBI-ProteinID:
XP_053163516
LinkDB
All DBs
Position
3:complement(207653050..207735484)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHSPLLYGVLDHRM
GTSEKDRPCETCGKNLAECLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLTFE
ERKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TTKKIVDLVVSNFIQSFDTAIEHNKEIESLLGKAQENLNPLVVLNLLKRIPAEDIPLLLM
NPESGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANIDFMRKLVRNGPEVHPGANF
IQQRHTPMKRYLKYGNREKMAQELKYGDIIERHLHDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVSLPSPAILKPVTLWTGKQV
FSLILKPSDSCSVKANLRTKGKQYCGKSEDLCSNDSYVSIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGRLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPSRSEPALSKNELVLTAESIMKKNEFLC
CQDSFLQEIKKFITSMSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRE
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAHLDTDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICVSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQYLKEELPKVV
VQGIPEVSRAVIHIDEQSGKEKFKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQRDSVCGVSECIIMGIPMNIGTGLFKLLHKADKEANPPRRPLIFD
NPDFHIPLTT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgcgagacggatgtggcgaaaaagataagccacatctgcttt
gggatgaagtctccagaagagatgcgtcagcaggctcacatccaggtggttagtaaaaac
ctatacagtcaagataacaatcactctcctctactctatggtgtactggatcatcgaatg
ggtacaagtgaaaaggaccgtccatgtgaaacttgtggaaaaaacctggcagagtgtttg
ggacattatggctatatcgacctggagttgccttgtttccatgtgggatacttcaaagct
gtgataggcattttgcagatgatttgcaagacttgttgccgtatcatgctgacctttgaa
gaacgtaaacaatttctggattatctgaagagacctggcttgacctacctccagaaacga
ggcttgaaaaaaaaagtctctgaaaagtgcaggaaaaaaaacacttgcccatattgtggg
gcttttaatggtactgtgaagaagtgtggtttactgaagataatccatgagaaatataag
accactaagaagattgtggatcttgttgtgtctaacttcatacagtcctttgacactgcc
atagaacataacaaagaaattgaatccttgctaggaaaagcccaggagaacttgaatccg
ttagtggtgttgaatcttttaaagagaattcctgcagaagatattcctctgcttttgatg
aaccctgaatcaggcaagccttctgacttgatcttgacacgactcttggttcccccgctg
tgcatcagaccctctgtggtgagtgacttaaaatctggcaccaatgaggacgacttgaca
atgaagctgacagaaataattttcctcaatgacgtgatcaaaaagcatagaatatcggga
gccaaaacccagatgataatggaggactgggatttcctgcaattgcagtgtgccttatac
attaacagtgaactctctggcattcctctgaacatggcacccaagaagtggacaagaggc
tttgttcaaagactgaagggcaagcagggtcggtttagaggaaatttgtctggaaagcga
gtggatttctctggcaggacagttatttcacctgatccaaacttacgaattgatgaagtt
gctgttcctgttcatgttgccaaaatactaacatttcctgagaaggtcaacaaagctaac
attgattttatgaggaaacttgttcggaatggtccagaggttcatcccggagccaatttt
attcagcagcggcacacaccaatgaaaaggtacttgaaatatggaaaccgtgagaagatg
gctcaggagctgaagtatggtgatattatagaaaggcacctccatgatggagatatagtc
ctgttcaaccggcaaccctctttacacaaactaagcatcatggctcatatcgcgagagta
aaaccccatcggactttcagatttaatgaatgtgtctgtacaccatacaatgctgacttt
gatggtgatgagatgaatcttcatcttcctcaaactgaagaagccaaagcagaagcactt
gttctgatggggaccaaagcaaatttggtaacaccaagaaatggagaacctcttattgct
gcaatccaggatttccttacaggtgcctacctcctcacactgaaagacactttttttgac
cgagctaaagcttgtcagattattgcttctatcctggttggcaaggatgaaaaaattaaa
gttagtcttccatctccagcaattcttaagcctgtaaccttgtggacaggaaagcaagtc
ttcagtctcatacttaagcctagtgacagttgttctgtcaaggccaacctgcgaaccaaa
ggaaagcagtattgtggcaagtcagaagacttgtgcagtaatgattcctatgtttcaatc
cataatagtgagctgatgtgtggcagcatggacaaaggaactttagggtctgggtccaag
aacaatatcttctacattttgctgagagactgggggcaagtggaagcagctgatgctatg
tcacgacttgcaaggcttgctcctgtctacctctctaaccggggattttcaattggaatt
ggtgatgtaaccccaggacaggggctgctgaaggcaaaatatgaacttctaaatgctggt
tataagaaatgtgatgaatatattgaagctttgaatactggcaggctgcagcagcagcct
ggttgtacagcagaagagacactagaggctctgatcctgaaagagctgtctgtgattaga
gaccatgctggcagtgcctgtctcagagaactggataagagtaacagccccctcatcatg
gctctttgtggttcaaaaggctcctttattaatatatcccagatgattgcctgtgtagga
cagcaggcaatcagtgggtcacgtgtgcctgatggctttgaaaaccggtccctgcctcat
tttgagaagcattccaagcttccggcagctaaaggttttgttgccaatagtttctattct
ggcttgacaccgacggagtttttcttccacacaatggctggtcgtgaaggtctagttgat
acagctgtaaaaacagctgaaacgggatacatgcagagacgattagtgaaatcacttgaa
gatctttgctcacagtatgatttgactgtcaggagttctactggtgacattatacagttc
atttatggtggggatggtttggatcctgcggccatggaagggaaagatgaacctctggag
ttcaagcgtgtcctggacaacatcagagcagtgtatcctagccgaagtgagccagctctt
agtaaaaatgaattggtgttaactgctgaatccatcatgaagaagaatgaattcctttgt
tgccaagacagctttctacaggaaattaagaagttcatcacaagtatgtctgaaaagatc
aagaaaaccagggacaagtatggcattaatgacaatggcacaacagagcctcgtgtgtta
tatcagttagaccggattactccaacacagcttgagaaatttctggagacctgtagagag
aagtatatgagagcgcagatggagcctggctctgcagtgggagctctgtgtgctcagagc
attggtgaacctggcacacagatgactctgaaaacctttcactttgctggtgttgcctcc
atgaacatcacattgggagtgccaaggatcaaagagatcatcaatgcctccaaagccatc
agcacaccaattatcacagcacacctcgacacagatgatgatccagattttgcccgtttg
gttaaaggaagaatagagaaaacactactgggagagatttcagagtacattgaagaagtt
ttccttcctgatgactgttttattcttgtcaagctttcattggaacggattagattgctt
agactggaagttaatgcagagacggtgcggtattctatttgcgtctcaaagctgagagtg
aagcctggggatgtggctgttcatggtgaggctgttgtgtgcgttactccccgtgagaat
agcaagagttcaatgtactatgtcttgcagtaccttaaagaagaactaccaaaagtggtt
gtgcaaggtatcccagaagtgtctcgtgctgttattcatattgatgagcagagtggaaag
gagaagttcaaactgctagtagaaggtgacaacctgcgagctgtcatggccacacatggt
gtcaaaggcacaaggactacttcgaacaacacttatgaggttgagaaaaccctgggaatt
gaggcagctcgaaccaccattatcaatgagatccagtacacgatggtaaaccatggtatg
agcattgaccggagacatgtaatgttgctgtctgacctaatgacatacaagggtgaagtt
ctgggcattactaggtttgggttggcaaaaatgaaggagagtgtgttgatgcttgcatcc
tttgaaaagacagcagaccatctctttgatgctgcatactttgggcagagagattcagtg
tgtggtgtctctgagtgcatcattatgggtatcccaatgaacattggcactggacttttc
aagctgctgcataaagctgacaaggaagcaaatcccccaagaaggcccttaatttttgat
aaccctgactttcatattccccttaccacgtag
DBGET
integrated database retrieval system
