Helicobacter cholecystus: NCTC13205_00423
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Entry
NCTC13205_00423 CDS
T06600
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00540
Lipopolysaccharide biosynthesis
hcl01100
Metabolic pathways
hcl01250
Biosynthesis of nucleotide sugars
Module
hcl_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC13205_00423 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcl01005
]
NCTC13205_00423 (hldD)
Enzymes [BR:
hcl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NCTC13205_00423 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
hcl01005
]
Core region
NCTC13205_00423 (hldD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
DUF5873
Motif
Other DBs
NCBI-ProteinID:
VEJ24287
UniProt:
A0A3D8IX78
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Position
1:complement(435589..436599)
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AA seq
336 aa
AA seq
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MRYIEDTLENKNILITGGAGFIGSALAFYFQKHHPKANVYVLDCFRNDETFPSGNFKSLG
SFKNLIGFKGHVICENINNTQAMSKLFEKTRFDYVFHQAAISDTTVLNQEIVMQTNHDCF
LHLLQLTREQNGVMIYASSAGTYGNSPAPNKIGEGEVPENVYGFSKLCMDESVRSILKND
PKTPIIGLRFFNVYGAREFYKGKTASMILQLSLQAMHHKKVRLFKYGEQKRDFVYIEDVI
QANILAMKAQKGGVYNVGSGKARCFNDIVERIQYHFGEFEVEYIDNPYTFYQNYTEADIS
LSTQDLGYHPRFSLQEGIDDYMPEIKAIYAREKKCL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgagatacattgaggatacattagagaataaaaatattcttattacaggaggtgcaggg
tttattggaagcgccctagcattttattttcaaaagcatcaccctaaggctaatgtttat
gtacttgattgctttagaaatgatgaaacatttccaagtggcaattttaaatctttagga
agttttaagaatcttataggatttaagggacatgtaatttgtgaaaatattaataatacc
caagcaatgagtaagttatttgaaaaaactagatttgattatgtttttcatcaagctgca
atttctgatacaactgtgcttaatcaagaaattgtgatgcaaactaatcatgattgtttt
cttcatcttctacaattaactagagagcaaaatggagtaatgatttatgcctcaagtgca
ggaacttatggaaactctccagcacctaataagattggagagggtgaagtgccggagaat
gtgtatggcttttcaaagctttgtatggatgagagtgtaagaagtattcttaaaaatgat
cccaaaactcctattattggtctaagattttttaatgtttatggagcaagagagttttat
aaaggcaaaacagcctctatgattcttcaactttctctccaagcaatgcatcataaaaaa
gttagactttttaaatatggtgagcaaaaaagagactttgtttatattgaagatgtgatt
caggctaatattttggcaatgaaggcacaaaaaggtggggtttataatgttgggagtgga
aaggcaagatgttttaatgatattgtcgaaaggattcaataccatttcggtgaatttgaa
gtggaatatattgacaatccttatactttctatcaaaactatacagaagcagatatttca
ttaagcacgcaagatttgggatatcaccctagatttagtttgcaagagggaattgatgac
tatatgcctgagattaaggcaatttatgcaagggagaagaagtgtctttaa
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