Helicobacter cholecystus: NCTC13205_00771
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Entry
NCTC13205_00771 CDS
T06600
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00300
Lysine biosynthesis
hcl01100
Metabolic pathways
hcl01120
Microbial metabolism in diverse environments
hcl01230
Biosynthesis of amino acids
Module
hcl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC13205_00771 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hcl01002
]
NCTC13205_00771 (dapE)
Enzymes [BR:
hcl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NCTC13205_00771 (dapE)
Peptidases and inhibitors [BR:
hcl01002
]
Metallo peptidases
Family M20
NCTC13205_00771 (dapE)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M42
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
VEJ24623
UniProt:
A0A3D8IWZ1
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Position
1:complement(820504..821637)
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AA seq
377 aa
AA seq
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MTKEIVKKLISYPTITPLECGIFEYIATLLEGFSYERMDYSEVKNAFFYKDFSPTQQEGK
LHLCFAGHVDVVPAGEGWESDPFEAVIKEECLYGRGAQDMKGGIGAFLDAIIKAQKEGIY
ENLAISILLTSDEEGDGINGTRYILECLHKENRLPHFAIVAEPTSQEVVGDMIKIGRRGS
MNGKITIKGVQGHVAYPDQCLNPIELLGSRLGEIAGKNLDDGDENFQPSKIVVTDIRGGM
QVCNVTPSDLVMMFNVRNSPLTHQEDVQIYLHKVLQGLEYDLEVKTSSLPFLTPRENTLI
SKLTLCITKITGITPKLSCSGGTSDARYFASYGIGVAELGVCNDRIHAKNECVKLQDLDN
LAKIFKMLIESFCKEDE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaattgttaaaaaacttatctcttatcctacgattactcccttagagtgt
gggatttttgagtatatcgctacgcttttagagggtttctcttatgagcgaatggattat
tctgaagtgaaaaatgcttttttttataaagatttttctccaacacagcaagagggaaaa
ctccatttgtgttttgcgggacatgttgatgttgtgccagcaggtgagggatgggagagt
gatccttttgaggcagtcattaaagaggagtgcctttatggtaggggggcacaagatatg
aagggggggataggtgcatttctggatgcgattatcaaggcccaaaaagagggaatttat
gagaatcttgcaatttccatacttttaaccagcgatgaagagggggatgggattaatggt
acacgctatattttagagtgtttgcacaaagaaaatcgccttccccattttgcaattgtt
gcagagcctactagtcaagaggttgtaggagatatgattaaaattggtcgaagaggatca
atgaatggaaaaattacaatcaaaggggttcagggacatgtcgcctatccggatcaatgt
cttaatcctattgagcttttggggtcaagattgggagaaattgcaggcaaaaatcttgat
gatggggatgagaattttcaaccaagcaaaattgttgttacagatattcgtggaggaatg
caagtgtgcaatgtaaccccaagcgatttggtgatgatgtttaatgtgcgtaattctccc
cttacacatcaagaggatgtgcagatctacttgcacaaagtcttgcaaggtttagagtat
gatctagaggtcaaaacaagttcactcccctttctcactccaagagaaaatacactcatc
tctaaacttactctctgcattacaaagattacgggaataacacccaaactcagttgcagt
ggagggacaagtgatgcacgatattttgcttcttatggaattggagttgcagaacttgga
gtatgcaatgatagaatccatgcaaaaaatgagtgtgtaaaacttcaagatttagataat
cttgcaaaaatatttaaaatgttaattgaatctttttgtaaggaggatgaatga
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