Helicobacter cetorum MIT 99-5656: HCD_01770
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Entry
HCD_01770 CDS
T02033
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Pathway
hcm00540
Lipopolysaccharide biosynthesis
hcm01100
Metabolic pathways
hcm01250
Biosynthesis of nucleotide sugars
Module
hcm_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HCD_01770
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcm01005
]
HCD_01770
Enzymes [BR:
hcm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HCD_01770
Lipopolysaccharide biosynthesis proteins [BR:
hcm01005
]
Core region
HCD_01770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Ldh_1_N
FCSD_central
Motif
Other DBs
NCBI-ProteinID:
AFI05383
UniProt:
I0ER14
LinkDB
All DBs
Position
complement(352794..353786)
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AA seq
330 aa
AA seq
DB search
MRYIDDELENKTILITGGAGFIGSNLAFYFQNNHPKAKVIVLDKFRNNTLLSNKRPSSLG
HFKNLIGFKGEIITADINNPLDLRRLENLHFDYLFHQAAISDTTVLDQELVMRTNYQAFL
RLLEIANKKKAKVVYASSAGTYGNTKAPNRVGFGENPENVYGFSKLCMDEYIRSNSDSNI
QVGLRYFNVYGAREFYKEKTASMILQLALQAMEFKEVKLFEFGEQLRDFVYIEDVIQANV
KAMKTQKSGVYNVGYSESRSYNDIVKILKEHLGDFKVTYIKNPYSFFQEHTQADIESTSL
DLDYTPLYDLESGIKDYLPHIHMIFKEQHT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattgatgatgaactagaaaataaaaccattttaattaccggtggagcaggc
tttataggcagtaatttagccttttattttcaaaataaccaccctaaagctaaagtaatt
gttttagataaatttcgtaacaacacgcttttaagcaacaagcgtccaagctctttgggg
cattttaagaatttaatcggttttaagggtgaaattatcacagcagatattaataaccct
ttggatttaaggcgtttagaaaatttgcattttgattatttattccaccaagctgctatt
tctgatactacggtattagaccaagaattagtgatgcgaactaattatcaagctttttta
aggcttttagaaattgccaataaaaaaaaggctaaggtagtttatgcttcttcagcaggc
acttatggtaacactaaagcccctaatagagtaggatttggtgaaaacccagaaaatgtc
tatgggttttctaaactttgcatggatgaatatattcgctctaatagtgatagcaacatt
caagtgggcttacgctattttaatgtctatggggctagagaattttataaagaaaaaacc
gcttctatgattttacaactagctttacaagctatggaatttaaagaagttaagcttttt
gaatttggcgagcaattaagggattttgtctatattgaagatgtcattcaagccaatgtg
aaagcgatgaaaactcaaaaaagtggtgtctataatgtgggctattcagaatcaagaagt
tataatgatattgttaaaattttaaaagagcatttaggggatttcaaagttacttacatt
aaaaatccttatagctttttccaagagcatacacaagctgatattgaatccacttcacta
gatttagactatacgcctttatatgatttagaaagtggtatcaaagattatttgccccat
attcatatgatttttaaagaacaacacacatga
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