Halomonas chromatireducens: LOKO_00378
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Entry
LOKO_00378 CDS
T04292
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
hco
Halomonas chromatireducens
Pathway
hco00280
Valine, leucine and isoleucine degradation
hco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LOKO_00378 (lcfB_1)
Enzymes [BR:
hco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
LOKO_00378 (lcfB_1)
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Gene cluster
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Prot_ATP_ID_OB_C
DUF934
Motif
Other DBs
NCBI-ProteinID:
AMC99474
UniProt:
A0A0X8HBA9
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All DBs
Position
complement(384978..386495)
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AA seq
505 aa
AA seq
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MSQNLFETFAARMQERGDADFITTRDGRRYSHADALAASGRLAGALAAQGVTPGDRVAVQ
VDKSPEAILLYLACLRIGGVFLPLNTGYTADEVRYFLADAEPALFVCRPAALEQARAVAG
ETGCPAVETLGSDGDGSLMEAAQRATPFDAFEPREQNDLAAILYTSGTTGRSKGAMLTHH
NLGSNAATLAEAWRFTAEDRLIHALPIFHTHGLFVGCNVTLMAGSSMLFLPSFDADVIFQ
EMPRGTVLMGVPTFYPRLVADARLTPEATASMRLFVPGSAPLTAETHREFERKSGHAILE
RYGMTETNMNLSNPYDGERRAGTVGMPLPGVEYRITDRETHEPLPNGQIGMLEIRGPNVF
IGYWRMPEKTREELLEDGFFVTGDLAMVDEHGYVHIVGRDKDMVISGGYNVYPKEVEQVI
DEIEGVKESAVIGVPHPDFGEGVTAVVVPEAHARLDERDVIDFLKDRLAKYKQPKRVLFV
DALPYNTMGKVQKNELRKNYQDIYR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacctcttcgagaccttcgccgcccgcatgcaggaacgcggcgatgccgat
ttcatcaccacccgtgacggccgccgctacagccatgccgatgccttggccgccagcggc
cggctggcaggcgccctggccgcgcagggtgtcacccccggcgaccgggttgccgtgcag
gtggacaagagccccgaggcgatcctgctctatctcgcctgcctgcggatcgggggcgtc
ttcctgccgctaaataccggctataccgccgacgaggtccgctacttccttgccgacgcc
gaaccggcgctgttcgtctgccgcccggccgccctcgagcaggccagggcggtggccggc
gagacaggctgcccggcggtggaaaccctgggcagcgacggcgacggcagcctgatggag
gccgcccagcgggccacgccctttgatgccttcgagccgcgtgagcagaacgacctggcg
gcgatcctctatacctcgggcaccaccgggcgctccaagggcgccatgctgacccaccac
aacctgggctccaatgccgccaccctggccgaggcctggcgctttaccgccgaggatcgc
ctgatccatgccctgccgatcttccacacccatgggctgttcgttggctgcaacgtcacc
ctgatggccggctccagcatgctgttcctgccgagcttcgacgccgacgtcatcttccag
gaaatgccccgcggcacggtgctgatgggcgtgccgaccttctatccccgcctggtagcc
gatgcacggctgactcccgaggccaccgccagcatgcggctgttcgtccccggctcggcc
ccgctcaccgccgagacccaccgggaattcgaacggaagagcggccatgccatcctcgag
cgctacggcatgaccgagaccaacatgaacctctccaacccctacgacggcgagcggcgc
gccggcaccgtgggcatgccgctgcctggcgtggagtaccgcatcaccgaccgcgaaacc
catgagccgctccccaatggtcagatcggcatgctcgagattcgcggccccaacgtcttc
atcggctactggcggatgcccgagaagacccgcgaggagctgctggaggatggcttcttc
gtcaccggcgacctggccatggtcgacgagcacggctacgtccatatcgtcggccgcgac
aaggacatggtgatttccgggggctacaacgtctatcccaaggaggtcgagcaagtgatc
gacgagatcgagggggtgaaagagtccgccgtgatcggcgtgccccacccggacttcggc
gaaggcgtcaccgccgtggtggtgccggaagcccacgcccgactcgacgaacgggatgtc
atcgacttcctcaaggaccggctggcgaagtacaagcagcccaagcgggtgctcttcgtc
gacgcgctgccctacaacaccatgggcaaggtgcagaagaatgagctgcgcaaaaattac
caggacatctatcgttag
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