Halomonas chromatireducens: LOKO_01078
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Entry
LOKO_01078 CDS
T04292
Symbol
rfaF_2
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00540
Lipopolysaccharide biosynthesis
hco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LOKO_01078 (rfaF_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hco01005
]
LOKO_01078 (rfaF_2)
Enzymes [BR:
hco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
LOKO_01078 (rfaF_2)
Lipopolysaccharide biosynthesis proteins [BR:
hco01005
]
Core region
LOKO_01078 (rfaF_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AMD00155
UniProt:
A0A0X8HCU6
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All DBs
Position
complement(1140175..1141218)
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AA seq
347 aa
AA seq
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MSAVPLSGERILVVGPSWVGDMVMAQSLLKTLRQRQPDCHIGVVAPGWSQPILERMEEVA
EVATLDVTHGEFGWGSRRALAKRLTGRFDRAIVLPRSWKSALVPFLARIPRRTGYTGEQR
FGLLNERRPLDKTVLDQTVKRFVALGLPADADLEALSVPRPRLRVDTENLAAVRDSLGLS
SRPAIGMMPGAEYGPAKQWPLGHFRELAQRLVAEGFEVRVLGGPKDAEAGAVIAEGQTGV
HNLCGKTRLADAVDLLADCRQVVTNDSGLMHVAAAVGTGVQALYGSSSPRYTPPLTDEAT
IHTLALECSPCFQRTCPLGHTNCLVQLSPQRVLQAVLASRAELIGRS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgcctttgtcgggcgagcgcatcctggtggtcggcccatcctgggtcggt
gacatggtgatggctcagagcctgctgaagacactcaggcagcgccagcccgattgccat
atcggcgtcgtggcgcccggctggtcgcagccgatcctggagcgcatggaagaagtcgcc
gaggtggcgacgctggacgtgacccacggtgaattcggctggggcagccggcgggcgctg
gcgaagcggcttacgggtcgcttcgaccgggcgatcgtgttgccccgttcctggaaatcg
gcgctggtccccttcctggcgcgcataccccggcgcaccggctataccggtgagcagcgc
ttcgggctgctcaacgagcgacgcccgctggacaagacggtgctggaccagaccgtcaag
cgtttcgtggcgctgggcctgccagctgatgctgatctggaagctctgagcgtgccgcgt
ccgcggctgcgggtcgatacggagaacctggctgccgtgcgcgacagcctggggctctcg
tcacggccggccatcggcatgatgcccggggccgaatatggcccggccaagcagtggccg
ttgggacactttcgtgaactggcacagcgcctggtggcggaaggcttcgaggtgcgtgtg
ctcggcggccccaaggatgccgaggccggcgcggtgatagcagaagggcagacgggcgtg
cataacctgtgcggcaagacacggctggccgacgccgtggatctgctggccgactgtcgg
caggtggtcaccaatgactcgggattgatgcatgtggcggccgccgttgggaccggcgtc
caggcactgtatggttcgtcgtcgccgcgctacaccccgcccctgaccgacgaggccacg
attcataccctggcgctggagtgctcgccctgttttcagcgtacctgcccgctgggccat
accaactgtctggtgcagctctcgccccagcgggtcctgcaggcggtactggcctcgcga
gcagagctcatcggccgtagctga
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