Halomonas chromatireducens: LOKO_02419
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Entry
LOKO_02419 CDS
T04292
Symbol
hsdM_1
Name
(GenBank) Type I restriction enzyme EcoKI M protein
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hco02048
]
LOKO_02419 (hsdM_1)
Enzymes [BR:
hco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
LOKO_02419 (hsdM_1)
Prokaryotic defense system [BR:
hco02048
]
Restriction and modification system (R-M system)
Type I R-M system
LOKO_02419 (hsdM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
UPF0020
Eco57I
Motif
Other DBs
NCBI-ProteinID:
AMD01479
UniProt:
A0A109UM38
LinkDB
All DBs
Position
complement(2561254..2562897)
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AA seq
547 aa
AA seq
DB search
MTQNDIVQKLWNLCDVLRDDGINYSDYVTELVLLLFIKMEYENTQAGLLNAHALPKWARW
PELTERSGLELLNYYRQMLLDLSKSEDRLIAAIYTDAQTRMREPRHLEQLIRDLDGIDWF
SAQRDGLGDLYEGLLEKNANETKSGAGQYFTPRALINAMVCCIRPRPGEVIQDPAAGTAG
FLIAADAYIKQQTDEHFDLDAKAQAFQKLKAFVGIELVPGTRRLALMNCLLHGMEGDDEG
VVHLGNALGEAGKALPRADVILANPPFGTAKGGEASITRDDLTFRTSNKQLAFLQHIYRG
LKPGGRGAVVLPDNVLFEAGVGTEIRRDLMEKCHLHTLLRLPTGIFYAQGVKTNVLFFTR
GTVENPHQDEGCTDSLWVYDLRTNMPSFGKRTPFTEAHLKPFEQCYNPVSSDELAEQLAA
REEGDWSFGAEQIETDRAAAADDANAGVDDKLQTSRWRRFSREWIRDTKGDSLDITWLKD
ADSLAAENLPEPDVLAAEAMSELTEALRELDGLMAALGSQDEAAAQKKMLAEALGLADAA
GSDEVKA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaacgacatcgtccagaagctgtggaacctctgcgacgtactgcgtgacgac
ggcatcaactactccgactacgtcactgagctggtgctgctgctgttcatcaagatggag
tatgagaacacccaggccggactgctcaacgcccatgcgctgccgaagtgggcgcgctgg
ccggagctcacggagcgctcagggctggaactgctcaactactacaggcagatgctgctc
gatctctcgaagagtgaagaccgactgatcgctgccatttacacagacgctcagacccgc
atgcgcgagccgcgccacctggagcagttgatccgcgacctggacggcatcgactggttc
agcgcccagcgggatggcctgggagacctctacgaagggctgctggaaaagaatgccaac
gagaccaagtccggcgccggccagtacttcacgcctcgcgccctgatcaatgccatggtg
tgctgcattcgccccaggcccggtgaggtgatccaggaccccgccgcgggaacggcgggc
tttctgatcgccgccgatgcctatatcaagcagcagaccgacgagcactttgatctcgac
gccaaggcccaggccttccagaagctcaaggccttcgtcggcatcgagctggtgcccggc
acccgccgcctggcgttgatgaactgcctgctgcacggcatggagggagacgatgagggc
gtggtgcatctgggcaacgccctgggcgaggccggcaaggcactgccccgagccgacgtg
atactggccaatccccccttcggcaccgccaagggcggtgaggcaagcatcacccgagac
gatcttaccttccgcaccagcaacaagcagctcgccttcctgcagcatatctaccgcggg
ctcaagccgggcggccgcggcgccgtggtactgcccgacaacgtactgttcgaggccggt
gtgggcaccgagattcgccgcgacctgatggagaagtgtcaccttcacacactgctgcgc
ctacctaccggtatcttctacgcccagggcgtgaaaaccaacgtgctcttctttacccgc
ggcaccgtagagaacccgcaccaagacgaaggctgcaccgacagcctctgggtctacgac
ctgcgcaccaacatgccgagcttcggcaagcgcactcccttcaccgaggcgcacctcaag
cccttcgagcagtgctacaaccccgtgagcagcgacgaactggccgagcagcttgccgcc
cgggaggagggcgactggagcttcggtgccgagcagatcgaaaccgaccgtgccgctgct
gccgatgacgccaatgcaggagtagacgacaagctgcagacctcccgctggcgccgcttc
agccgcgagtggatccgcgacaccaagggcgattcgctggatatcacctggctcaaggac
gccgacagtcttgccgccgagaacctgcccgaacccgacgtgctcgccgccgaggccatg
agcgagctgaccgaagccctacgcgaactcgacggcctgatggccgccctcggcagccag
gacgaagccgccgcccagaagaaaatgctggctgaagcgctggggcttgcggatgctgcc
ggtagcgacgaggtgaaggcatga
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