Hippocampus comes (tiger tail seahorse): 109506802
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Entry
109506802 CDS
T04969
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109506802 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hcq04090
]
109506802 (vcam1)
04091 Lectins [BR:
hcq04091
]
109506802 (vcam1)
CD molecules [BR:
hcq04090
]
Proteins
109506802 (vcam1)
Lectins [BR:
hcq04091
]
I-type lectins (Siglecs)
109506802 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
ICAM1_3_5_D2
C1-set
Ig_C17orf99
ICAM_N
DUF2808
Motif
Other DBs
NCBI-GeneID:
109506802
NCBI-ProteinID:
XP_019711336
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MARRGLPLVCLFLSGALMWRRCAAALRVDLSPGGPLFKLGERQRLVCSVGDCPVAPVISW
TPLGDRPLNAGVRTRDRLSVLTFDPVEMEHEGPLLCQVTCGEQRKYAKTHIRLYAFPSDP
EIRGERPVRAGEESTLTCEVRDLYPAEVLTLDWLRGGQVVRSVAGEAGAGAVRAAYTFTP
RGGPSGENLTCRATLDLRDLPPEERTRQTVARLHVTFAPVVTALSDPGAVMSGSVLVLRC
SASGNPAPVLTWTFRPEGGGSAQVKGHGEELALAAQAGEFRCEARNREGRHSEAVRVRVN
APPSNTSMSVSPGREVPEGRRVTFTCRSHGAPPPVLVLSREGVELWRSDSTPSLTFSLSV
RPQDPARYRCDATNAFGTEHVTRNVTLEAPPRNTTVTVAPSAAVRAGQNVTVSCRSVGFP
PPDVTLEKAADGTRRRSADGVFRLVNVTAGDSGLYRVNASNRWGHQVRVFRLSVTEPEAP
PAPAAVLVPDSGTLSR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgcgggcttcctcttgtctgcctctttctctcaggtgcgctgatgtggcgg
cggtgcgcggcggctctgcgggtggacctttctcccggcgggccgctcttcaagctgggc
gagcgtcagcggctcgtgtgctccgtcggcgactgccccgtggcgcccgtcatctcgtgg
acgccgctcggcgaccggccgctgaacgccggcgtccggacgcgggaccgcctgtcggtg
ctcacctttgaccccgtggagatggagcacgaaggcccgctgctgtgtcaagtcacctgc
ggggagcaacgcaaatacgccaaaacgcacatcagactttacgccttcccgtcggacccc
gagatccgaggtgagcggcccgtccgcgcgggggaggagtccacgctgacgtgcgaggtg
cgtgacctttaccccgccgaggtgctgactcttgattggctgaggggaggccaggtggtc
cgcagcgtggcgggagaagccggggccggcgccgtccgagcggcgtacaccttcacccct
cgcggggggccgtcgggggagaacctgacttgcagggccaccctcgacctgcgcgacctg
ccccccgaggagcgcacccggcagaccgtcgcccgcctccacgtgaccttcgctccagtg
gtgacggcgctgtcggaccccggcgcggtgatgtcggggtccgtcctggttctgaggtgt
tccgcatccggcaacccggcgccggtcctcacgtggaccttcaggcccgagggtggcggg
tcggcgcaggtcaaaggtcacggagaggagctggcgctggccgcgcaggcgggggagttc
cgatgcgaggcccgcaaccgcgagggccgacacagcgaggccgtccgcgtgcgcgtcaac
gctccgcccagcaacacctccatgtcggtgagtccgggccgagaggttccggagggccgg
cgcgtcaccttcacctgtcgctcccacggagccccgccccccgtcctggtgctgagtagg
gaaggggtggagctctggaggtcggactccaccccctcgctcaccttcagcctgtccgtg
cgccctcaagaccccgcccgctaccggtgcgacgccaccaacgccttcgggacggaacac
gtcacacgaaacgtcacgttggaagctcctccgaggaacacgacggtcacggtggcgccg
tcggcggcggtgcgggcgggtcagaacgtgacggtgtcctgccgcagcgtgggcttcccg
ccgccggacgtcaccctggagaaagcggcggacgggacccggcgccgctccgccgacggc
gtcttccgattggtcaacgtgacggcgggcgactcgggcctctaccgggtcaacgccagc
aaccgctggggccaccaggtccgcgtgttccgcctgagcgtgacagagcccgaggctccg
cccgctccggccgccgtcctggtgccggactcggggaccctctcgcgttga
DBGET
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