Hippocampus comes (tiger tail seahorse): 109507860
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Entry
109507860 CDS
T04969
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04020
Calcium signaling pathway
hcq04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109507860
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109507860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcq04040
]
109507860
Ion channels [BR:
hcq04040
]
Ligand-gated channels
Glutamate (ionotropic)
109507860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
109507860
NCBI-ProteinID:
XP_019713148
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MASPRGNTTPSPWPPLFFILLIASPRSLHARPLLLHSSINVAVVFSGSSYQSEVRGRLSG
ENFVDLPVVVSPVTVLVNDTNPRDLLTRLCDTMATEKLHGVVFEDDVGSGASTQVTEVAQ
ILDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQVLCMFKIMEEYDWGEFA
IITSLLPGYDTFVDIVQAYTDTSYFMWDLQDVLTIEMSVGANDMRTRRILQQVDSQVLLV
YCSFEEAHFLFSQALEVGLVGPGYIWILPSSAVGNPEVPPPASFPVGVIGVITEQWRKSL
RQRVREGVAIVAKGAESFKKQHGFIPEGHGDCSKPAKHSGTNALFRHMLNVTWERRDLSF
NSRGFLSSPSMVIIALDRERVWDKVGTYGRGILQVRYPVWPRYGNFLEHVTDDRHLTVAT
LEEHPFVMVENVDPGTGTCVRNTVPCRRQSNHSESIIGHSESYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVVYRRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSL
VSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKY
NQKGVEEALGSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRLIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFKGVEDHGRSSGLAKPDLTS
NYAQANMLKMLRTAKDLVSTANVESSLDNATKTIEHFSRHSGGGMPVRVPHVAAETVPGG
FAYITENHVSFPQHSISPQRNVSRPTPLRYTLPTHSTSCLYERPLPVSSLSSPHLAVSET
LPHQHPRHYQTTGRLYVDTHPHSRFISYTDLQLPDIYTSHPAPLAQNQYAEGGIHQRKLR
SKSFQCGDGDAERKKFRDREKNKICLSELKANNLQGNHISAPSVESIYSVEGTCPPVENY
RSWPPEDLMLKGRRRRRRPSFLKATWGSEQIHQLHESQSSLSSQSPSTLPDLFPCILTPT
IAAKAHNPDHLRNNLCLPRNQAYLHIREDHRRLAGRKGQRLRYSQSTHLPTYGEAVRHGA
GFGRGMVRRATSLLSRQYAHYLNSYPGLPLYHSPLDLQNHNQAPGSHAPASPVCQLLACG
GGRCGGQRALLYQDSVYGAYGIYQSSQTGSETQGSQGVVGQAAGSPCVLRPWRRVSSLES
EV
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccaaggggaaacactacaccttctccctggcccccgctgttcttcatcctc
ctcattgcatctccgagaagcctgcatgccaggccccttctcctgcactcgtccatcaac
gtggcggtggtgttcagcggctccagctatcagagcgaggtgcgaggccggctgagcggc
gagaactttgtggacctacccgtggtggtgagccctgtgacggtgctggtcaatgacacc
aatccgcgcgacctgctcacccgcctttgtgacaccatggcgacggagaagctgcatggt
gtggtgtttgaggacgatgtcggatcgggtgccagcacacaggtgaccgaggtggcgcaa
atcctggacttcctgtcaactcagacggctctgcccattgtgggcatcagtggcggctcg
gcggtggtcatcccatacaaggcggaaggatcgtctttcctgcagatgggagcgtctctg
gagcagcaggtcctctgtatgttcaagatcatggaggagtacgactggggcgagtttgcc
atcatcaccagcttgctgccgggatacgacacatttgtggacatcgttcaggcctacacg
gatacgtcctacttcatgtgggacctccaggatgtcctgaccatcgagatgtccgtcggg
gccaacgacatgaggaccaggcgcattctgcagcaggtggactcccaggtgctgctggtg
tactgctcctttgaggaggcccactttcttttcagccaggcgcttgaggtgggcctggtg
ggaccgggctacatctggatcctgcccagctcggccgtgggcaaccccgaggtgccgccg
cccgccagctttcccgtgggcgtcatcggcgtcatcacggagcagtggcgcaagagcctg
cggcagcgggtgcgcgagggcgtcgccatcgtggccaagggcgccgagagcttcaagaag
cagcacggcttcatcccggaaggacacggcgactgcagcaagcccgccaagcactccggc
accaacgcgctcttcaggcacatgctgaatgtgacgtgggagaggagggacctgtcattc
aacagcaggggcttcctctccagcccttctatggttatcatcgccctggaccgagagaga
gtgtgggacaaggtgggcacatacggccgaggcatcctgcaggtacgctaccccgtgtgg
ccgcgctacggcaacttcctggagcatgtgaccgatgaccgtcacttgaccgtggccacg
ctggaggagcacccctttgtcatggttgagaacgtggaccccggcacgggcacatgcgtc
cgcaacacggtaccttgcaggcgacagtccaatcactctgagagcatcatcggccactcg
gagtcgtacaccaagctgtgctgcaagggcttctgcatcgatatcctgaagaaactctcc
cgcaccatcaaattttcctacgacctctacctggtcaccaacggcaagcacggcaagctg
gtacgcgggacctggaacggtatgattggcgaggttgtgtacagacgcgccgacatggcc
atcggctcgctcaccatcaacgaggagcgctcggagatcatcgacttctccgtgccgttc
gtggagacgggaatcagcgtcatggtcgcccgcagcaacggcaccgtctccccgtccgcc
ttcctcgagccgtacagtccggccgtttgggtcatgatgttcgtcatgtgtttgacggta
gtggccgtgacggtgttcgtcttcgagtacttcagtccagtcgggtacaaccgtagcctg
gtgagcgccaaagctccgggcggccccaccttcaccatcggcaagtcggtgtggctgctg
tggggcatcgtgttcaacaactcggtgcccatcgagaaccccaaaggcaccaccagcaag
atcatggtgttgatctgggccttcttcgccgtcatcttccttgcctcgtacaccgccaac
ctggccgccttcatgatccaggagcagtacatcgacactgtgtcggggctctccgacaag
aagttccagaagccgcacgagcactacccccccttccgcttcgggacggtcccgaacggc
agcaccgagcgcaacatccgcagcaactaccccgacatgcacacgcacatgatgaagtac
aaccaaaagggggtggaggaggcgcttggcagcctcaaaacgggaaagctggacgccttc
atctacgacgcggccgtgctcaactatatggcgggcaaggatgaaggctgcaagctggtg
accatcggcagcggcaaagtgttcgccaccaccggctacggcatcgccctgcagaaagac
tcacgctggaagaggctcatcgacctggcgctgttgcagttcctcggcgacggtgacacg
cagcgcctggagacggtgtggctctcaggcatctgccagaacgagaagaacgaggtgatg
agcagcaagctggacatcgacaacatggcgggcgtcttctacatgctgctggtggccatg
ggcctcagcttgctggtgttcgcctgggagcacctgctctactggaagctgcgccactcg
ctgcacaagtcccacaagctcgacttcctgttggccatcagtcggggtatctacagctgc
ttcaagggcgtggaggatcacggccgttcgtccggcctggccaaacccgacctgacatcc
aactacgcccaagcaaacatgttgaagatgctgcgcaccgccaaggacctggtctccacc
gccaatgtggagagctccctggacaacgccaccaagacgatcgaacacttcagccggcac
agtggtggtggcatgcctgtccgcgtcccccatgtcgccgccgaaacggtccctggaggc
tttgcgtatatcaccgagaaccacgtgtctttccctcagcattctatctccccgcagagg
aatgttagcagacccacgccactgcgctacacactcccaacacactctacttcctgtctg
tatgagcgcccgcttcccgtctccagtctcagcagcccgcacctggcggtcagtgaaacg
ctcccccatcagcatcctcgccactaccagaccaccggaagactctacgtagacacccac
ccccactcgaggttcatctcgtacaccgacctgcagctgcctgacatctacacctctcat
cccgcccccctggcccaaaaccagtacgcagaggggggcatccaccagagaaaactgagg
tccaagagcttccagtgcggggatggcgacgcggagagaaagaagttcagggatcgcgag
aagaacaaaatctgcctcagtgagctcaaagccaacaacctccagggcaaccacatctct
gcccccagcgtggagagcatttactcggtagaggggacttgtcctccggtggagaactac
agatcctggcctccggaggacctcatgctgaagggaagacgtaggcgccgacgcccctca
ttcctgaaagcaacgtggggcagcgagcagatccaccagctgcacgagtcccagtcatcc
ctttccagccagtctccctccacacttcctgacctcttcccatgcatcctcacgccgacc
attgccgcgaaagcccacaacccagaccacctccggaacaacctgtgcctcccgcggaac
caggcctacctccacatcagagaggatcacaggaggcttgctggccgtaaaggccaacgg
ctgaggtattcccagtctacacatctcccaacatatggtgaggcggttcgccacggtgct
gggttcgggcgggggatggtacggagagctaccagcctgctcagcagacagtacgcccac
tacctgaactcctatcctgggctgccactctaccactcacccctcgacctgcaaaaccac
aaccaggccccaggcagtcacgcaccagccagccccgtatgccagctgctggcctgcggc
gggggccgatgcgggggtcagcgggccttgctgtaccaggatagcgtgtatggagcttac
gggatctatcagagctcccagactggatcggagacgcaaggaagtcagggagtagttggc
caggcagcagggagcccctgcgtactccggccctggagacgggtgtccagtttggagtcg
gaggtgtga
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integrated database retrieval system
