Hippocampus comes (tiger tail seahorse): 109514851
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Entry
109514851 CDS
T04969
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03030
DNA replication
hcq03410
Base excision repair
hcq03420
Nucleotide excision repair
hcq03430
Mismatch repair
hcq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109514851 (pold1)
03410 Base excision repair
109514851 (pold1)
03420 Nucleotide excision repair
109514851 (pold1)
03430 Mismatch repair
109514851 (pold1)
03440 Homologous recombination
109514851 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcq03032
]
109514851 (pold1)
03400 DNA repair and recombination proteins [BR:
hcq03400
]
109514851 (pold1)
Enzymes [BR:
hcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109514851 (pold1)
DNA replication proteins [BR:
hcq03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109514851 (pold1)
DNA repair and recombination proteins [BR:
hcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109514851 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
109514851 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
109514851
NCBI-ProteinID:
XP_019723814
UniProt:
A0A3Q3E049
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDYKRRNGAPFTGGVSHAKRSKMAGEWEDSPSHFEEELSMFDDVDMDSEEMEGQAGHDVI
PVGDLFSADLNPRWRRPHAPSLDPSSDSLVFQQIDLDYYLGAAVAGMPGQLYGKVPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPAPNGFTPDNLGDFKRELNSAVLKDMRSNKDNISVTV
LAVDITRKENMYGYHGNRSLDFLRITMAMPRLIAPAKRLLEQGLNCGPFPMHCYQSFEAN
IDFEIRFMVDCNVVGCCWIELPKGQYRVREEKNAADTSPKHPGKESLCQYEVDVAWTNLI
SHPAEGEWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQQQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKHLLQSWAEFLRTVDADIVTGYNIQNFDFPYLLNRAAALKVN
LFPYLGRVRGIKSVLRDLNFQSKQMGRRENKIINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAAKQDLVMPVVKSQGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGAADKLGLSPADFIKTPTGDQFVKSSVRKGLL
PEILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEETKRLVESKYIISNGYQGDAKVIYGDTDSVMVKLGVATVQEAMNIGK
EAAEWVSSHFVAPIKLEFEKVYFPYLLINKKRYAGLYFSSNAEVHDKMDCKGIETVRRDN
CPLVANLINTCLQKILIDRDPQGAVSHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMKKRDAGSAPNLGDRVPYVIVKAAKGAAAYMKSEDPIYVLENNIPIDTQH
YLDQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattataaaaggcgcaatggtgcaccattcactggtggcgtttcccacgccaaacgc
agcaagatggccggtgaatgggaggacagtccctcacattttgaggaggaattgtccatg
tttgatgatgtggacatggattcagaggagatggaggggcaagctgggcatgatgttatt
cctgttggtgacctcttttcggcagacctaaaccctcgctggcggaggcctcatgcccct
tcactggacccatcttctgattctttggtgtttcaacagattgatctggactattattta
ggagcggctgtagcaggcatgcccggtcagttgtacggaaaagtccccatcattcgcatg
tttggagtgacagacagtggaaatagcgtatgctgtcacgttcatggctttgcgccttac
ttctatgtcccggccccaaatgggttcacaccggataacttgggtgactttaaaagggaa
ctcaactctgctgtgttgaaggacatgcgctccaacaaagacaacatctcggtcaccgtg
cttgctgtggacatcacccgtaaagaaaatatgtacggttaccacggcaaccgaagcttg
gatttcttgcggataaccatggcgatgcctcgtctcattgcccccgccaagcgactgctg
gagcagggcttgaattgcggaccttttcccatgcactgttaccaatcatttgaggccaac
atagattttgaaataagattcatggtggactgcaatgtggttggatgctgctggatcgaa
cttccgaaaggccaatacagagtccgtgaggaaaaaaatgcagcggacacatctcctaag
cacccgggcaaggagtccttatgtcagtacgaggtggatgtggcatggaccaacctgata
agtcacccagcggaaggagagtggcagaggatcgcgccgctccgcgtcctcagctttgac
attgaatgtgccggaagaaaaggaatcttcccggaagctgacaaagacccggtgattcag
atagcgtccatggtgcagcagcagggcgagacggagcccttcattcgcaccgtcttcacg
cttcagtcctgcgccagcattgtgggctctcagattttgtgcttcactcaagagaagcac
cttctacagagctgggctgaatttttaagaacagtagatgccgatatcgtcaccggatac
aacatccagaactttgacttcccctacttgctcaaccgggctgccgcgttaaaggtcaat
ctgtttccatatttgggccgggtgagagggatcaagtcggtgttgcgggacctcaacttc
cagagcaagcagatgggccgcagagagaataagatcatcaacatggagggccgcgttcag
tttgatctgctgcaggttctgctcagggactacaaactgcgctcctacacactgaatgct
gtgagtttccactttctgcaagaacaaaaggaggacgtgcagcactccatcatcaccgat
cttcagaatggcaacgaacagacacggcgacgtttagccgtgtattgcctgaaagacgcc
tacctgccgctgcggttgctgcagaagttgatgtgcgtgatcaattacatggagatggcc
agagtgaccggagtgcctctaacctatctgctctccagaggtcaacagatcaaagttgtc
tcccagctactgcgacaggccgccaagcaggacctggtgatgcctgttgtgaagtcgcag
ggaggtgaagattacaccggagccaccgttattgagccagagaaaggctattacagcgtt
cccatcgccaccttggatttttcgtccttgtatccgtccatcatgatggcgcacaatctg
tgctacaccaccttgctgcagaaaggtgcggccgataaactggggttgtcaccagcggac
ttcatcaagacgcccaccggcgatcagtttgtgaagagttctgtgaggaagggcctcctg
cctgagatcctggagaacttgctgtctgctagaaagagggcgaaagcggagctgaagaaa
gaaacggacccttttaagaagcaggtcctggatggccggcagctggccctcaaaatcagc
gcaaactctgtctacggcttcacgggagctcaggtgggcaagctgccctgcctggagatc
tcccagagcgtgaccgggtttggaagacagatgattgaggaaaccaaacgattagtggag
tccaagtacatcatttcgaatggttaccaaggtgatgccaaggtaatttatggagacacg
gactctgtcatggtcaagcttggcgttgccacggtgcaggaggccatgaacattgggaaa
gaggccgcagagtgggtgtcttcccatttcgtagcccccatcaaactggagtttgagaag
gtgtacttcccgtacttgctgatcaacaagaagcgctatgccggcctctacttctcctcc
aacgcagaagtgcacgacaagatggactgcaaaggcatcgaaaccgtccgcagagacaac
tgcccccttgtggccaatcttattaacacttgcctgcagaaaatcctcatagacagggat
ccccagggtgccgtgtctcacgccaaagaggtgatctctgacctgctgtgcaaccgcatc
gacatcagccagctggtcatcaccaaggagctgacgcgcacggcacaggagtacgctggc
aagcaagcgcacgtggagctggctgagaggatgaagaagcgagatgcaggcagcgctcca
aacctgggagaccgcgttccgtacgtcatcgtgaaggccgccaaaggagcggcggcgtac
atgaagtcagaggaccccatctacgtgctggaaaacaatattcccattgacacacagcac
tacctggaccagcagctgtccaagcctctgctgagaatatttgagcccattcttggggag
agcaaggcagagagcgtcctcctcaagggcgaccacacgcgctgtaagaccgtgttgacg
tcgaaggtcggcggcctgatggcgtttgctcagaagaggagcacttgcattggctgcaag
gctgtgctcaagacggacgctgctgtgtgtgatttctgtaagaagaaggagtcggaactg
taccaaaaagagattttccatttaaacacactggaggagcgtttctctcgactgtggact
cagtgccagcgttgccaaggctcgctccatgaagacgtcctttgcaccagccgcgactgc
cccatcttctacatgaggaagaaggttcaaaaagatctggacgatcagagcaagctggtg
tctcgttttggatggtga
DBGET
integrated database retrieval system
