Hippocampus comes (tiger tail seahorse): 109517675
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Entry
109517675 CDS
T04969
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcq03016
]
109517675 (cdkal1)
Enzymes [BR:
hcq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
109517675 (cdkal1)
Transfer RNA biogenesis [BR:
hcq03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109517675 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
109517675
NCBI-ProteinID:
XP_019728547
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MPSACDSLIDDIEDMVSSHDPTPHERQSARRSIIPRSRKKTDILDNEELQADSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTNDPAEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIQELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRRVVDFLKERVPGVTIATDIICG
FPGETEEDFSETIDLVKCYRFPSLFINQFYPRPGTPAAKMDQVPPHVKKQRTKELSQLFH
SYNPYDHKVGERQHVLVTEESFDTQYYVAHNKFYEQVLVPKRFEFKGKMIEVDIYEAGKH
FLKGRPVEDIKPFTPSIAAPLQKGEVSGLMKEQMVYGVQGPSSVSSSVLLIGSYSVDREL
LKRLGVGLALAAALLAFIVERIY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggcctgtgactctctgattgacgacattgaggacatggtgtcttctcatgac
cccacacctcatgagaggcagtctgcccgaaggagtatcatacccaggtccaggaaaaaa
actgacattttggacaatgaggaactccaagctgacagtctgattcctgggactcagaaa
atctggatgaaaacatggggctgcagtcacaacaactcagatggggaatacatggctggg
cagcttgctgccagtggatacaaaatgacaaatgacccagctgaagcagacctatggctt
ctgaacagctgcactgtgaaaaatccagcagaagaccacttcagaaactcaatcaaaaaa
gcccaagagcaacagaagaaggtggtggtagccggttgtgttccacaggcccaacctcga
atggactatctcaaaggtcttagcatcattggggtccaacagattgatcgagtggtcgag
gtggtggacgaggctgttaaaggtcactcagttcgtcttttgggccagaagaaagatggc
ggccggaggcttgggggagccagactggatcttcccaagataaggaaaaaccctctcatt
gaaatcatctccattaacacagggtgcctgaatgcatgtacctactgcaagacgaagcat
gccagaggagacctggccagctatcccatacaagagctggttgagagagctcgacaatct
ttccaagagggagtatgtgaaatctggctgaccagtgaagacacaggagcttatggtcga
gacattgggactgacctgcccactctactgtggaggctagttgaggagattcctgaaggg
gccatgctcaggctcgggatgaccaacccaccttatatcctagaacaccttgaggagatg
gcgaagatattgaatcatccacgtgtctatgccttccttcacgttcctgtgcagtcagcc
tctgacagcgtcctcatggacatgaagagggagtattgcattgatgacttcagaagagtg
gttgacttcttgaaagaacgggtcccaggtgtaacaatagcgacagatataatctgtggc
tttcccggcgagacggaggaagacttcagcgaaactatagacctggtgaaatgttatcga
ttccccagtctcttcatcaatcagttctaccccagacctgggacaccagccgccaagatg
gatcaagtgcctccacatgtgaagaaacaacggacaaaagaactatctcaactctttcac
tcctacaacccttatgaccacaaggttggggagagacaacacgtgttggtgaccgaagag
tcctttgatacccaatattatgtggctcacaacaagttctatgagcaggtactggttccc
aagaggttcgagttcaaagggaaaatgattgaagtagacatctacgaggcaggaaaacac
ttcctgaaaggacgaccagtggaagacataaaacctttcactccctccattgctgctcca
cttcaaaaaggagaagtgtctggcttgatgaaggagcagatggtatatggtgtccaaggt
ccctcttctgtgtcttcctctgttttgttgattgggtcttacagtgtggaccgagagcta
ttgaagaggctgggggtcggactggcgctggctgccgcattactggcttttattgtggag
aggatctattag
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