Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1948
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Entry
HDEF_1948 CDS
T00911
Symbol
kdsD
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00540
Lipopolysaccharide biosynthesis
hde01100
Metabolic pathways
hde01250
Biosynthesis of nucleotide sugars
Module
hde_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HDEF_1948 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
HDEF_1948 (kdsD)
Enzymes [BR:
hde01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
HDEF_1948 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
Lipid A
HDEF_1948 (kdsD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
Bunya_RdRp
Motif
Other DBs
NCBI-ProteinID:
ACQ68536
UniProt:
C4K7J3
LinkDB
All DBs
Position
complement(1780752..1781729)
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AA seq
325 aa
AA seq
DB search
MILLNQVNYQQIAKAVLKIECAGLAQLEQYINEDFEKACAHIFSCQGKLVIMGMGKSGHI
GCKIAATFASTGTPAFFVHPSEANHGDLGMISQGDIVLAISNSGEANEILSLIPLLKRQH
IFLICMTADPNSTMGEAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARG
FTEKDFARSHPGGRLGRKLLLRVSDMMHTGSDIPFVYSNASLRDTLLEMTQKKLGLTAIC
DHNMKIEGIFTDGDLRRVFDKQIDLNKAHINHLMTSNPVQVKPGLLAVEALNLMQLHHIT
ALLVSKKSRLVGVVHMHDMLRSGVI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatattactcaatcaggtaaattatcaacaaattgccaaagcagtattaaaaattgaa
tgtgccggtttggctcaattagagcagtacatcaatgaagattttgaaaaggcttgcgcc
cacattttttcttgtcagggcaagttagtgatcatgggaatgggtaaatctgggcatata
ggttgtaaaatagccgctacctttgccagcaccggaacaccggctttttttgttcatccg
agtgaagcaaaccatggcgatcttggcatgataagtcagggtgacattgtgttagcgatt
tcaaattccggtgaagcgaatgaaattttgtccttgatccctttgttaaagcgccaacat
atttttttgatttgtatgacagcagatcccaacagcacgatgggagaagcggcagatatt
cacctgtgtattaaagttcctcaagaagcttgcccgttgggattagcgcccaccaccagc
acgacggctactttggtgatgggggatgcgcttgcggtggcccttttgcaagctcgagga
tttactgaaaaagacttcgcacgctctcatcctgggggaaggttaggccgtaagttgctg
cttcgggtcagtgatatgatgcacactggaagcgacattcctttcgtttattcaaatgct
tctttgcgtgatactttgttggaaatgacccaaaaaaagctgggtttaaccgcgatttgt
gatcacaatatgaaaattgaagggatttttactgatggggatttacgccgagtgtttgat
aaacaaatagatttgaacaaggcgcacattaatcacctgatgacttccaatccggtacag
gttaaacctggtttattggctgtggaggcccttaacttaatgcaattacatcatattacc
gctttgttggtgtctaaaaaaagccgtttggtgggggtggtgcatatgcatgacatgctg
agatccggagtaatctaa
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