Halalkaliarchaeum desulfuricum: AArcSl_0226
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Entry
AArcSl_0226 CDS
T06283
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AArcSl_0226 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdf03021
]
AArcSl_0226 (rpoE1)
Enzymes [BR:
hdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AArcSl_0226 (rpoE1)
Transcription machinery [BR:
hdf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AArcSl_0226 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
S1_2
Motif
Other DBs
NCBI-ProteinID:
AUX07881
UniProt:
A0A343TFK9
LinkDB
All DBs
Position
222634..223218
Genome browser
AA seq
194 aa
AA seq
DB search
MYKRVRLKDTVEVPPKHLADVTPQRVKALLQEKLEGRMDEDVGSVVSVVEVHDIGDGAVL
PNRPGVYYEAEFDAITFDPEMQEVVDGTVVEVVEFGAFVGIGPVDGLLHVSQISDEYLAY
DGANQQLASSESDQSLGVDDPVRVRIVTKSIDERNPRDSKIGLTAKQPGLGKHEWLEKAR
RRREQEGEASAGGE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaacgcgtacgactcaaggacacggtcgaggttccgccgaaacatctggcggac
gtcaccccccagcgggtgaaggccctgttgcaggagaagctcgagggacgaatggacgag
gacgtcgggagcgtcgtgagcgtcgtcgaggtgcacgacatcggcgacggcgccgtgctg
ccgaaccgtccgggagtgtactacgaggcggagttcgacgccatcaccttcgatccggag
atgcaggaggtcgtcgacggcaccgtcgtcgaggtcgtcgagttcggcgccttcgtcggc
atcggcccggtcgacgggctgttgcacgtctcgcagatctccgacgagtatctcgcctac
gacggcgccaaccagcagctcgcctccagcgagtcggaccagtcgctcggggtcgacgac
cccgttcgggtccggatcgtcacgaagagcatcgacgagcggaacccccgcgactcgaag
atcggcctgacggcgaaacagcccggactgggcaaacacgaatggctcgagaaggctcgc
cgtcggcgcgagcaggagggcgaagcctcggcggggggcgaatag
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