Hartmannibacter diazotrophicus: HDIA_0587
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Entry
HDIA_0587 CDS
T05217
Symbol
lysS
Name
(GenBank) Lysine-tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HDIA_0587 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hdi01007
]
HDIA_0587 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdi03016
]
HDIA_0587 (lysS)
Enzymes [BR:
hdi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HDIA_0587 (lysS)
Amino acid related enzymes [BR:
hdi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HDIA_0587 (lysS)
Transfer RNA biogenesis [BR:
hdi03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HDIA_0587 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
SON54128
UniProt:
A0A2C9D1V2
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All DBs
Position
1:634895..636559
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AA seq
554 aa
AA seq
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MSALSATASAIDPALFEAAGRSKAWPFEEAKKIIARIEKRGVPEGGVLFETGYGPSGLPH
IGTFGEVARTTMVRHAFLLLTEGRVPTRLLSFSDDMDGMRKVPDNVPNQDLLRQHLGKPL
TKVPDPFGTHESFGHHNNARLRAFLDHFGFDYEFASASDYYARGILDEKLLVMLERYDDV
MAIMLPTLREERSKTYSPFLPVHPKTGVVMQVPVEERNPSKGTIVWTDPDTGERFETLVT
GGHAKAQWKPDWALRWAALGVTYEMSGKDHIDNVKTSSQICKVLGGVPPEGFNYELFLDD
KGEKISKSKGNGITIDEWLAYASPESLALFMYQKPKTAKKLFFDVIPKNVDEYFSFLGAY
DRQDIDARLNNPVWHIHSGNPPKVDLPVPFAMLLNLVSASHAHDRGTLWGFISRYAPGVT
AETHPKLDELAGYAIRYYEDRVRPFKTFKTPDDVERAALAALKERLSGLPAGSDSETIQN
AVLDVARGIERYQDTKKLGPDGGPGVSVEWFSALYQLLLGQERGPRFGSFVALYGISETC
VMINDALAGRLGNG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctcagcgccaccgcatccgccattgatcccgcgcttttcgaagccgccggc
cgctccaaggcctggcccttcgaggaagcgaaaaagatcatcgcgcggatcgagaaacgg
ggcgttccggagggcggggttctcttcgagaccggctacggtccctcgggccttccgcat
atcggcacctttggcgaggtggcccgcaccaccatggtgcgccatgccttccttctcctg
accgagggccgggtgccgacgcgcctgctctccttctccgacgacatggacggcatgcgc
aaggtgccggacaacgtgccgaaccaggacctgctgcgccagcatctcggcaagccgctg
accaaggtgcccgatcccttcggcacgcacgaaagcttcggccatcacaacaacgcccgg
cttcgcgccttcctcgaccatttcggcttcgactacgagttcgcctcggcgtcagactat
tacgcgcgcggcattctcgacgagaagctcctcgtgatgctggagcgctatgacgacgtc
atggcgatcatgctgccgacgctgcgcgaggagcggagcaagacctattcgcccttcctg
ccggttcacccgaagacgggcgtcgtgatgcaggtgccggtggaggaacgcaatccgtcg
aagggcaccatcgtctggactgatcccgacaccggcgaacgcttcgaaacgctggtgacg
ggcggtcacgccaaggcgcagtggaagccggactgggcgctgcgctgggcggccctcggc
gtcacctacgaaatgagcggcaaggatcacatcgacaacgtcaagacgtcgagccagatc
tgcaaggtgctcggcggcgtgccgcccgagggcttcaactacgaactcttcctcgacgac
aagggcgagaagatttcgaagtccaagggcaacggcatcaccatcgacgagtggctggct
tacgcgagcccggagagcctcgcgctcttcatgtatcagaagccgaagaccgccaagaag
ctcttcttcgacgtcattccgaagaacgtcgacgagtatttctccttcctcggcgcctat
gacaggcaggacatcgacgctcgcctgaacaacccggtctggcacatccactccggcaat
ccgccgaaggtggacctgccggtgcctttcgccatgctcctgaacctcgtctcggccagc
cacgcccatgatcgcggcacgctctggggcttcatctcccgctatgcaccgggtgtgacg
gctgaaacgcatccgaagctcgacgaactcgccggctacgcgatccgctattacgaggat
cgggtgcggcccttcaaaacgttcaagacgccggacgacgtggagcgcgccgcacttgcc
gcgctgaaggaacggctttcgggcttgcccgccgggtcggactccgaaacgatccagaat
gcggtgctcgatgtggcacgggggatcgagcgctatcaggatacgaagaaacttggcccc
gacggcggcccgggcgtctcggtggaatggttctctgccctctaccagcttcttctcgga
caggaacggggtccgcgcttcgggtccttcgtcgcgctctacggcatcagcgagacctgc
gtcatgatcaacgacgcccttgccggacgtctcggcaacggctga
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