Halobacterium sp. DL1: HALDL1_06250
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Entry
HALDL1_06250 CDS
T03878
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl00300
Lysine biosynthesis
hdl01100
Metabolic pathways
hdl01120
Microbial metabolism in diverse environments
hdl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HALDL1_06250
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hdl01002
]
HALDL1_06250
Enzymes [BR:
hdl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HALDL1_06250
Peptidases and inhibitors [BR:
hdl01002
]
Metallo peptidases
Family M20
HALDL1_06250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AHG03236
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Position
complement(933159..934226)
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AA seq
355 aa
AA seq
DB search
MSEFDPLSFHETAVQTPSHEDVTEMRELLCETLRDHGQDPDVDDGGNVLASRESGHPHVV
LNTHIDTVPPHVGFSREGDVVRGRGACDAKGPLAALLAAFLAVDPTEGRVTLAITPDEET
DSNGAHALDLDADAYIVGEPTDLAACTSARGRFQGTVELTGMGAHAASPDEGVNAVAALE
STLAAIRTFDAERGPDEHPELGPPTLTPTVVSGGDAANRVPDRSELVVDRRTVPPESQEE
FFAGFEAHVRDAVDESVGADVHPVDRDTPFLEAFDTPDDADVVRAMVAAGAGDPRPFGAA
TEASYFAAEAPTVVFGPGVLADDDGPVAHAQREYVRRSDVRRAAEILTEAVGSLV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttcgacccgctctcgttccacgagacggcagtacagacgccgtcacacgag
gacgtgacggagatgcgggaactcctctgtgagacgctacgcgatcacggtcaggacccg
gacgtggacgacggcgggaacgtgctcgcgtcgcgcgagagcggccacccccacgtcgtc
ctcaacacccacatcgacacggtgccgcctcacgtcgggttctcgcgggagggtgacgtg
gtccgtgggcgcggcgcctgcgacgcgaagggaccgcttgcagcgctgctcgccgcgttc
ctcgccgtcgacccgaccgagggccgggtgaccctcgcgattacgcccgacgaggagacg
gactcgaacggtgcgcacgcactggacctcgacgcggacgcctacatcgtgggcgaacca
acggacctcgcggcgtgcacgagcgcccgcggccggttccaggggacggtcgaactcacc
gggatgggtgcgcacgccgcgagccccgacgagggggtgaacgccgtcgccgccctcgag
agtacgctcgcagcgattcggacgttcgacgccgagcgaggaccggacgagcaccccgaa
ctcggtccgccgacgctcacgccgacagtcgtctcggggggtgacgcggccaaccgcgtc
ccggaccgcagcgaactcgtcgtcgaccgccggaccgtcccgccggagagccaggaggag
ttcttcgccggcttcgaggcgcacgtccgcgacgccgtcgacgagtctgtcggcgcggac
gtccacccggtcgaccgggacacgccgttcctcgaggcgttcgacacgcccgacgacgcc
gacgtcgtccgtgcgatggtggcggcgggcgcgggcgacccgcggccgttcggtgccgcg
acggaagcctcctacttcgcggccgaggcgccgacggtggtcttcggcccgggcgtgctc
gcggacgacgacggccccgtggcccacgcacagcgggagtacgtgcgccgctcggacgtc
cggcgggcggcggagattctcaccgaagcggtcggctcgctcgtctga
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