KEGG   Helicobacter pylori BM012A: U063_0396
Entry
U063_0396         CDS       T02939                                 
Name
(GenBank) Proline dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
heb  Helicobacter pylori BM012A
Pathway
heb00250  Alanine, aspartate and glutamate metabolism
heb00330  Arginine and proline metabolism
heb01100  Metabolic pathways
heb01110  Biosynthesis of secondary metabolites
Module
heb_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:heb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    U063_0396
   00330 Arginine and proline metabolism
    U063_0396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:heb03000]
    U063_0396
Enzymes [BR:heb01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     U063_0396
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     U063_0396
Transcription factors [BR:heb03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    U063_0396
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AHA87759
LinkDB
Position
complement(382338..385895)
AA seq 1185 aa
MQKIIDDSLELAKKLQDSISNHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSPFEKLLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESQLKERILKRKNEKIILNVNFIGEEVLGEEEANARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
VKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTSEWKDQEQRFLNSLKGIATLDNATHRTQDRNAKQSGHTTYPNHPFKNES
DTDFILKANREWAKKVREKMHNAPILELYPEMDGRFEDPNLTPLEVFDKIHHKKIASVHL
ADKEAILKALEVAKSDKSRFSQKSFTEIHALMSQTAQLFRERRGDLVGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFTPKGVGVVIAPWNFPVGISVGTIAAPLAA
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIQFAILTG
GEDTAYKMLKANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGALADKPNEKVIKAIEELKGYENYE
IPVSFVDNNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMEAKDLDEAIEIVNSTGYGLT
SALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYIT
QFVGIHQEEEDENALKNPLSEALEGLTQKGYDEHTHELKRAIFMAKSYAYHYKHEFSQTK
DYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVALACLISQIPLTLSIENERANKDL
TFFLECLKALQANAPIVYESLQKFSEKLHTFNRVRYLKSDLDLLHEQASRLGMVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgacgattcactagaattagctaaaaaactgcaagatagtatcagt
aaccatttgagcgagcaagaaaaagcgttccactctaaaatgcaaaagcttttaaataat
cctgaaaacaaagtcatgctcatagagcttatggatcggagttttagatgcttggacaat
aaagcccgctttgaaatgattgagcatgttttggacaaatacaaaagccgtgagattttt
tctccgtttgaaaaattgcttttaatggggtttttaagctttgggaaaatgctccctgat
atgagcgtgcctttctttgtcaataaaatcagaagcgacacgaaagcgatggtcttggat
caagaagaaagccagttaaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aatgtgaattttattggtgaagaggttttaggcgaagaagaagctaatgcgcgttttgaa
aaatactctcaagccctaaaatccaactacatccaatacatttccattaaaatcacgacg
attttttctcaaatcaatatccttgattttgaatactctaaaaaagagattgtcaaacgc
ctagacgctctttatgccctggctttagaagaagaaaaaaagcaaggcatgcctaaattt
attaatttggatatggaggaatttagggatttggagctcacggtggagtcttttatggaa
tccatcgctaaatttgatttgaacgctggtattgtgctgcaagcctatatccctgattct
tatgaatatttgaaaaaactgcacgctttttctaaagaaagggttttaaaagggttaaag
cccattaaaatccgctttgttaagggagcgaacatggagagcgaagagacgatcgcttcc
gtgaaagactgggcgttacccacattttccaataagcaagacaccgattctaattacaat
aaaatgctggattttgttttagagggcgataattataaatacattcatatcggtgcagcg
agccacaatatttttgaaatcgcttatgtctatacgcgcatccatgcccttaatgaccct
gttgtgttagagcattttagctttgaaatgctagagggcatgagcttgcaagcgagccag
gaactaaaagagatgcacaaactcattctttatgcgccggtgtgcgatgaagcgcatttt
aacaatgcgatcgcttacttggtgaggaggttagatgaaaacacctcaagcgataatttc
atgaaagctttcttcaatctcaaagtaggcacgagcgaatggaaagatcaagaacaacgc
tttttaaacagccttaaagggattgccactttagacaatgccacccataggactcaagat
aggaacgccaaacaaagcgggcataccacttacccaaaccacccctttaaaaacgaaagc
gataccgattttattttaaaagccaaccgagaatgggctaaaaaagtgcgcgagaaaatg
cataacgctcctattttagagctttacccagaaatggatgggaggtttgaagatcctaat
ttaacccctttagaagtctttgataaaatccatcataaaaaaatcgctagcgtgcattta
gcggataaggaagcgattttaaaagctctagaagtggctaaaagcgataagagccgtttc
agtcaaaaaagcttcacagaaatccatgccttaatgagtcaaaccgcccaactttttaga
gaaaggagaggcgatttagtagggatttcggctttagaagtgggtaagactttcgctgaa
acggacgctgaagtgagcgaagccattgactttttggagttttacccttacagcttaagg
gtgttgcaagagcaaaataaaaaaacgaaattcacccccaaaggcgtgggtgtggtcatt
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagccgcg
ggcaatcgggtgatttacaagccctcaagtttgtctagcgtaacgggttataagctttgt
gagtgtttttgggatgcgggcgtgcctagagatgcactcatttacttgccctctaagggg
agcgacattagcgaacatcttttaaaagatgaaagcatccagtttgccattttaacaggg
ggcgaagacaccgcttataaaatgttaaaagctaaccccactttagccttgagcgctgaa
acaggcggtaaaaacgccactattgtgagcaaaatggcagacagagatcaagcgattaag
aatgttatccattcagcttttagcaattcagggcaaaaatgctccgccacttcgctttta
gtgttggaaaaagaagtctatgaagatgaaaactttaaaaagactctaatagatgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcgctctagcggac
aaacctaatgaaaaggtcatcaaagccatagaggaattgaaaggctatgaaaattacgaa
atcccggtaagctttgttgataataacccctatttgatgaagccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccattttatccgtgatg
gaagcaaaagatttagacgaagcgatagagatagtcaattctaccggttacgggctaact
agtgcgttagagtctttggatgaaagggagtgggaatattatttagaacgcattgaagcc
ggcaatatctatatcaacaaacccaccacaggagcgatcgttttgcgccagccttttgga
ggggttaaaaaatccgctgtggggtttgggaggaaggtgggtatttttaactatatcacg
cagtttgtgggtattcaccaagaagaagaagatgaaaacgccctaaaaaaccccttaagc
gaagctttagagggcttgactcaaaaaggctatgatgagcatacgcatgagttgaagcgc
gcgatttttatggcgaagagctacgcttatcattacaagcatgaattcagccaaactaaa
gactatgtcaaaatcagaggcgaagacaaccttttttcctacactaaagttaaaagcgtg
ggctatcgcatcaccgaaaaggacactttaagcgacatgttaggcgttgctttagcatgc
ttaatttctcaaatccctttaacgctcagcatagaaaacgaacgagcgaacaaagattta
acctttttcttagaatgcttaaaagcgctccaagcaaacgctcctattgtttatgaaagc
ttgcaaaaatttagcgagaaattgcatactttcaatcgtgtccgttatctcaaaagcgat
ttggatttattgcatgaacaagcaagcagattagggatggttttagccacggctaaaccc
tgcttgaacgggcgttttgaattgctgtattaccacttagagcgatcggttagcatctct
tatcatcgttatgggaatttaggctcaagggttttaaggcaacccacttgccacaaatca
tgctgtgctgaaaaataa

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