Candidatus Hydrogenosomobacter endosymbioticus: HYD_4760
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Entry
HYD_4760 CDS
T07863
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYD_4760 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hec01007
]
HYD_4760 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hec03016
]
HYD_4760 (lysS)
Enzymes [BR:
hec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HYD_4760 (lysS)
Amino acid related enzymes [BR:
hec01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HYD_4760 (lysS)
Transfer RNA biogenesis [BR:
hec03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HYD_4760 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BDB96343
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All DBs
Position
complement(549446..551050)
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AA seq
534 aa
AA seq
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MSVVSISREIMEKAGAWPFEEARKLVDRLNGENRTVLFETGYGPSGLPHMGTFGEVVRTS
MVRFAFEQMTGLKTDLICFSDDMDGLRKVPGNVPNQDMLAKFLNYPLTKIPDPFGKFESF
GHHNNAMLRSFLDSFGFEYRFMSSTDCYFSGMWDGVLLKVLESHEEILDIMLPTLGEERQ
KTYSPFLPISPKTGKVLQVFIEEYRVEAGTIVFKDEDGELTEVPVTGGRCKMQWKADWAS
RWVALGVDYEMSGKDLIPTVKASSQICKVLGGRPPEGFSFELFLDKEGKKVSKSKGNVGL
SVEDWMKYAPHESLSCFMYHAPRRAKRLYFDVIPRYVDEYISGLERFDQQRDTEKLGNPV
WHIHKGNPPKADCPVSFMMLLNLASVCGAKDKSTLWRFISRYCKDASPKTMPFFDRLTEF
AVRYYNDFIQPSKQYRAPSQTEREAILNLRGYLETLLSALESSENLEQIIQQEVYEMGKR
YGFQDLREWFSCLYEVLLGQREGPRMGSFIAFYGVSETIELIDKALEQPGSKGR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgtgtctatatctcgtgaaattatggaaaaggctggagcgtggccatttgag
gaagcgagaaagcttgtagataggcttaatggtgagaacaggactgttctgtttgaaaca
ggatatggtccatcaggccttcctcatatgggaacttttggtgaagtcgtgcgcacatcc
atggttcgatttgcatttgagcagatgactggactgaaaaccgacctcatatgtttttca
gacgatatggatggactcagaaaagttccaggtaacgttccaaatcaggatatgctggcc
aaatttttgaactaccctttgacaaagataccagatccgtttgggaaatttgagagcttc
ggacatcacaacaatgcgatgcttcgctcttttctagactcattcggattcgagtatagg
ttcatgagctctacagactgttatttttctgggatgtgggatggggttttgcttaaggtt
ctggagagtcacgaagagattttagatataatgcttcctactttgggcgaagaacgccaa
aaaacatatagcccatttcttccgatatcgccaaagactggaaaagtcttacaagttttt
attgaagagtatagggtggaggctggaacaatagtatttaaagatgaagatggagaatta
acagaagttccagtcactggtggacgctgcaaaatgcagtggaaggccgactgggcctcg
aggtgggttgctcttggagttgattatgagatgtctggaaaagaccttatcccgactgta
aaagcgtcttctcagatatgcaaagttctcggcggaagaccgccggaaggattctcgttt
gagttgtttttagataaagaggggaagaaagtttccaaatccaaaggaaatgttgggctt
agtgttgaggattggatgaaatatgctcctcatgaaagtctttcttgctttatgtatcac
gctcctcgtcgggcaaaaaggttatattttgatgtaatcccaagatatgtggatgagtat
ataagcggactggaaagatttgatcaacaaagagacactgaaaagcttgggaatcctgtg
tggcacattcataaaggaaatccgccaaaagctgattgtcctgtaagctttatgatgctt
ttaaatctcgccagtgtgtgtggcgcaaaagacaaaagcactttgtggaggtttatttca
agatattgcaaagacgcatctccgaaaacgatgccgttttttgataggttaacagaattc
gctgtgcgatattacaacgacttcatacagccaagtaagcagtacagagccccttcgcaa
accgagcgagaagcaattttaaacctgcgcggctatttggaaaccctgctgtctgcgcta
gaatcttctgaaaacctagagcaaataattcagcaggaagtttatgagatgggcaagcgt
tatggattccaagatcttagagagtggttttcatgtttgtatgaagttcttctcggacag
agagaaggccctcgtatggggtcatttatagcgttttatggtgtaagcgaaactatagag
ttaatagataaagctcttgaacagcctggctcaaaaggtcggtaa
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