Herbaspirillum sp. meg3: hmeg3_12420
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Entry
hmeg3_12420 CDS
T05024
Symbol
cbiD
Name
(GenBank) cobalamin biosynthesis protein CbiD
KO
K02188
cobalt-precorrin-5B (C1)-methyltransferase [EC:
2.1.1.195
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00860
Porphyrin metabolism
hee01100
Metabolic pathways
hee01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
hmeg3_12420 (cbiD)
Enzymes [BR:
hee01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.195 cobalt-precorrin-5B (C1)-methyltransferase
hmeg3_12420 (cbiD)
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Motif
Pfam:
CbiD
Motif
Other DBs
NCBI-ProteinID:
ASU39010
UniProt:
A0A223PAE2
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Position
complement(2787880..2789058)
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AA seq
392 aa
AA seq
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MQELERAEFDLTVLAPNGLRRGRTTGSCATAAVKAALTMLLRDEKIDKAEVSLPDGKHYL
LVPIQDVRVLDEKRVRAEVLKDGGDDPDNTHGATIFAEVARNDIGEIRFLAATGVGTATQ
PGLRVAVGEPAINPVPRQMMRLAVKEVLEELGMQGRISSGFDLAIGCEDGQKIAQKTFNP
RLGIVGGISILGTSGIVEPMSLASWIASIEVYIRVALADESRPNGVAACVAYLPGKIGRT
FARDALGLPEVRSVQIANFLGDALDFTQTALAEQGAELDVLWLAGHPGKLAKVLDGVWDT
HSSKSNMAMGGVARVASELAATLGFSPVLIAEIESANTVEAAIERLKDEPGSVSLWRDIE
ARIATLAQARMPSVKRVEVRLFDLDGNLLGGH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcttgaacgcgctgaattcgacctgaccgtgctggccccgaacggcctgcgg
cgcggcaggacgaccggcagttgcgccactgcggcagtgaaggctgcgctgaccatgctg
ttgcgtgacgaaaaaatcgacaaggcggaagtcagcctgccggacggcaagcactattta
ctggtgccgatacaagacgtccgggtgctggatgaaaaacgtgtgcgtgccgaagtcctg
aaagacggcggcgacgatccggacaacacgcatggcgcgacgatctttgccgaagtggcg
cgcaacgatatcggcgagattcgcttcctggcggcgaccggcgtcggtaccgcgacgcag
cccggtttgcgcgtggcggtcggtgaaccggccatcaatcccgttccgcgccagatgatg
cggctggcggtgaaggaagtactggaagaactgggtatgcaaggcaggataagctcaggt
ttcgatctcgccatcggttgcgaggacggccagaagattgcgcagaagacctttaatccg
cgtctgggtatcgttggcggcatctcgattctgggcacgtcgggcattgtggagccgatg
tcgctggcctcgtggatcgcttcgattgaagtgtatatccgcgtggcgctggccgatgag
agcaggccgaacggcgtcgccgcttgcgtggcatatctgccgggcaagatcggccggact
tttgcgcgtgatgcgttgggcttgccggaagtgcgctcggtgcagatcgccaattttctc
ggcgacgcgctggacttcacgcagacggccctggctgagcagggcgcagagttggacgta
ttgtggctggcgggtcatcccggcaagctggccaaagtgctcgacggcgtatgggataca
cattcgagcaagagcaatatggcgatgggcggtgtggcccgcgtagcgtcggaactggcg
gcgacgctgggattttcgcccgtgctgatcgccgagatagaaagtgcaaacacagtggaa
gcagcaatcgaacgtttgaaggatgaaccgggctcagtcagcttgtggcgcgacatcgaa
gcgcgcatcgccacgctggcgcaggcgcgcatgccgtcggtgaaacgcgtcgaggtgcgc
ctgttcgatctcgacggcaatttgctgggaggtcattga
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