Herbaspirillum sp. meg3: hmeg3_16355
Help
Entry
hmeg3_16355 CDS
T05024
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00362
Benzoate degradation
hee01100
Metabolic pathways
hee01120
Microbial metabolism in diverse environments
hee01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
hmeg3_16355
Enzymes [BR:
hee01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
hmeg3_16355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
ASU39699
UniProt:
A0A223PCA6
LinkDB
All DBs
Position
complement(3634812..3636188)
Genome browser
AA seq
458 aa
AA seq
DB search
MSISALPTASTVVDSILFRDAFGTAAMRALFSDHALIQRYIDVEVALAKAEARVGVIPAE
AAAVIAEKSTIDLIDFEHMRHETDIVGYPILPLVHQLVGMCGDAGRYVHWGATTQDIMDT
AVSLQVRDALDVVAGDIRELRKILADLALKHRDTAMAGRTHLQQALPVTFGYKAAIWLAM
FDRHQQRLAELRPRVAVVEFAGAAGTLASLGDKGFEVQRALAEELGLGVPATTWHVARDG
FAEAINLLALVTGSLGKIALDIMIMASTEFGEVYEPFVKGRGASSTMPQKRNPISSELML
AASKAVRQHAGLMVDAMVQDFERATGPWHAEWIAIPESFILTAGALHQAKFALGGLIVDT
DRMKVNLGISKGLIVAEAVMMGMAPLIGRQQAHDIVYDACRSANENKGSLADALAAMPEV
TKHFDRATIDRLTDPENYLGLAPQMVDQAIQLSGEIKA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctctgctcttccgacagctagtacggttgtcgattccattttgtttcgtgat
gcttttgggacggcggcaatgcgcgcgctgttctctgatcatgcattgattcaacgttat
atcgacgtcgaggtcgccctggcgaaagctgaagcccgtgtgggggtgattccggcagag
gccgccgccgtcattgcggaaaaatcgacaattgatctcatcgactttgagcacatgcgt
cacgagaccgacatcgtcggctatccgattctgcctctggtgcatcaattggtgggaatg
tgcggcgatgcgggccgctatgtccattggggcgcaacgacacaagacatcatggatacc
gccgtctcgctccaggtgcgtgatgccctggacgtggttgccggcgacatccgcgaactg
cgcaagatcctggcggatctggcacttaaacaccgtgatacggcaatggcaggacgcact
catctgcagcaagccttgcccgtgacattcggctacaaggcagcgatctggctggccatg
ttcgatcgccatcagcaacgtctggctgagctgcgtccgcgtgtggccgtcgttgaattt
gcgggcgccgcaggaacattggcatcgctgggcgacaaaggatttgaagtgcagcgcgca
ttggcagaagaacttggtctgggcgttccggcgacgacgtggcacgtcgcgcgggacggc
tttgccgaagccatcaacttactggcgctggttaccggctcgctcggcaagatcgcgctc
gacatcatgatcatggcgtcgacagaattcggtgaagtctacgagccgttcgtaaaaggg
cgaggcgccagcagcaccatgccgcaaaaacgcaatccgatatccagcgagttaatgctg
gctgcctccaaggcggtgcgccagcatgcggggctgatggtggatgcgatggtgcaggac
ttcgagcgcgccaccggaccatggcacgcggagtggatcgctattccagaaagcttcatt
ctcaccgccggtgcattgcatcaggcgaaattcgccttgggtgggttgattgttgacacc
gaccgcatgaaggtcaatctgggtatcagcaaaggacttattgtcgccgaggcagtgatg
atgggcatggctcctttgatcggccgtcagcaagcgcacgacattgtgtacgacgcttgc
cgcagcgccaacgaaaacaagggttcgctggcggatgccttggccgcgatgcccgaagtg
acgaagcatttcgacagggctacgatcgatcgcctgaccgatccggagaactatcttggt
cttgctccgcaaatggtggatcaggccattcaattgtccggcgaaatcaaagcctga
DBGET
integrated database retrieval system
