Helicobacter pylori F16: HPF16_0629
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Entry
HPF16_0629 CDS
T01910
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hef
Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hef03009
]
HPF16_0629
Enzymes [BR:
hef01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPF16_0629
Ribosome biogenesis [BR:
hef03009
]
Prokaryotic type
ribosomal protein modification factors
HPF16_0629
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Ca_bind_SSO6904
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
BAJ55226
LinkDB
All DBs
Position
629699..631018
Genome browser
AA seq
439 aa
AA seq
DB search
MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKRGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
NLVLKGYTDMTFIAQDSSSFLYDKGQKDGLIQLISAIDKQQALKSARILYLYPSSTTLEL
IGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNNSFKALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELTTPLKPGHYT
IMPSEFKDNILLAKVLRAF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagaaaacaaacaactctgcttaatttcattaggttgctctaaaaatttg
gtggattcagaggtgatgttaggcaagctttataactacacgctcactaatgacactaag
agcgctgatgtgattttgatcaacacttgcggttttattgaaagcgccaaacaagagagc
atccaaaccattctaaacgccgctaaagacaaaaaaaggggggcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagagttgatccctgaagtggatatt
tttaccggcgtgggggattatgacaagattgatataatgattgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttgagcgagcattataacgcacgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaaccaaaaatgctctttttgcgctatc
cctagctttaaggggaaattgcaaagtagggaattagactccattttaaaagaagtggaa
aatctcgtgcttaaaggctatacggatatgacttttatcgctcaagactctagctccttt
ttatacgataaggggcaaaaagacggcttgatccagcttattagtgcgattgacaaacag
caagccttaaagagcgcacgaatcttatacctctacccttctagcaccacgctagagctt
attggtgcgattgaaagttcgcccatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgctcaaaaaaatgcggcgcaactccagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaaagctttatcagaagtacgatcattgtaggg
catccggaagaaaatgagggcgaatttgaggaattgagcgcgtttttggacgagttccgg
tttgaccggttgaatatttttgctttcagcgctgaagaaaacacgcatgcctattcttta
gaaaaagtgcctaaaaaaatcatcaacgctcgcattaaagccttgaataaaatcgcttta
aaacaccagaacaattcctttaaggctttgttaaataagcccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatctcaggtgggcgcctgaagtggat
ggggaaatcttaatcaatgacagcgaactaaccacccccttaaaacccgggcattatacg
attatgcctagcgaatttaaagacaacatcttactcgctaaggttttaagggctttttaa
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