KEGG   Helicobacter pylori Rif1: C695_00265
Entry
C695_00265        CDS       T02317                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
her  Helicobacter pylori Rif1
Pathway
her00250  Alanine, aspartate and glutamate metabolism
her00330  Arginine and proline metabolism
her01100  Metabolic pathways
her01110  Biosynthesis of secondary metabolites
Module
her_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:her00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    C695_00265
   00330 Arginine and proline metabolism
    C695_00265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:her03000]
    C695_00265
Enzymes [BR:her01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     C695_00265
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     C695_00265
Transcription factors [BR:her03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    C695_00265
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AFV42868
LinkDB
Position
complement(57741..61298)
AA seq 1185 aa
MQKIIDDSLELAKKLQDSISNHLSDQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSPFEKVLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESQLKERILKRKNEKIILNVNFIGEEVLGEEEANARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
VKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHAINDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTSEWKDQEQRFLNSLKGIATLDNATHRTQDRNAKQSGHTTYPNHSFKNES
DTDFILKANREWAKKVREKMRNAPILELYPEMDGRFEDPNLTPLEVFDRIHHKKIASVHL
ADKEAILKALEVAKSDKSRFSQKSFTEIHALMSQTAQLFRERRGDLIGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNTKTQFTPKGVGVVIAPWNFPVGISVGTIAAPLAT
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLRDESIQFAILTG
GEDTAYKMLKANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGALADKPNEKVIKAIDELKSYENYE
IPVSFVNDNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMEAKDLDEAIEIANSTGYGLT
SALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYIT
QFVNICQEEEDENALKNPLSEALENLTQKGYDEHTHELKRAIFMAKSYAYHYKHEFSQTK
DYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVALACLISQIPLTLSIENERTNKDL
TFFLECLKALQASAPIVYESLQKFSEKLNTFNRVRYLKSDLDLLHEQASALGMVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgacgattcgctagaattagctaaaaaactgcaagatagtatcagt
aaccatttgagcgatcaggaaaaagcgttccactctaaaatgcaaaagcttttaaacaac
cctgaaaacaaagtcatgctcatagagcttatggatcggagtttcaggtgcttggacaat
aaagcccgctttgaaatgattgagcatgttttagacaaatacaaaagccgtgagattttt
tctccgtttgaaaaagtgcttttaatggggtttttaagctttgggaaaatgctccctgat
atgagcgtgcctttctttgtcaataaaatcagaagcgacacgaaagcgatggtcttggat
caagaagagagccagttaaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aatgtgaattttattggcgaagaggttttaggcgaagaagaagctaatgcgcgttttgaa
aaatactctcaagccctaaaatccaactacatccaatacatttccattaaaatcacgacg
attttttctcaaatcaatatccttgattttgaatactctaaaaaagagattgtcaaacgc
ctagacgctctttacgccctggctttagaagaagaaaaaaaacaaggcatgcctaaattc
atcaatttggatatggaagaatttagggatttagagctaacagtggagtcgtttatggaa
tccatcgctaaatttgatttgaacgctggtattgtgctgcaagcctatattccggattct
tatgaatatttgaaaaaactgcacgctttttctaaagaaagggttttaaaagggttgaag
cccattaaaatccgctttgttaagggagcgaacatggagagcgaagaaactatcgcttcc
gtgaaagattgggcgttacccacattttccaataagcaagacaccgattctaattacaat
aaaatgttggattttgttttagagggcgataattataaatacattcatattggcgcagcg
agtcataatatttttgaaatcgcttatgtctatacgcgtatccatgccattaatgatcct
gttgtgttagagcatttcagctttgaaatgctagagggcatgagtttgcaagcgagccag
gaactaaaagagatgcacaagctcattctttatgcgccggtgtgcgatgaagcgcatttt
aacaatgcgatcgcttacttggtgaggaggttagacgaaaacacctcaagcgataatttc
atgaaggctttctttaacctcaaagtaggcacgagcgaatggaaagatcaagaacaacgc
tttttaaacagccttaaaggaattgccactttagacaatgccacccataggactcaagat
aggaacgccaaacaaagcgggcataccacttacccaaaccactcctttaaaaacgaaagc
gataccgattttattttaaaagccaaccgagaatgggctaaaaaagtgcgcgagaaaatg
cgtaacgctcctattttagagctttacccagagatggatgggaggtttgaagatcctaat
ctaacccctttagaagtctttgatagaatccatcataaaaaaatcgctagcgtgcattta
gcggataaggaagcgattttaaaagccctagaagtggctaaaagcgataagagccgtttc
agtcaaaaaagctttacagaaatccatgccttaatgagtcaaaccgcccagctttttaga
gaaagaagaggcgatttgatagggatttccgctttagaagtgggtaagactttcgctgaa
acggacgctgaagtgagcgaagccattgactttttagagttttacccttacagcttaagg
gtgttgcaagagcaaaacacaaaaacgcaattcacccctaaaggcgtgggcgtggtcatt
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagctacg
ggcaatcgggtgatttacaagccctcaagtttgtctagcgtaacgggctataagctttgt
gagtgcttttgggatgcgggcgtgcctagagatgcgctcatttacttgccctctaaaggg
agcgatattagcgaacatcttttaagagatgaaagcatccagtttgccattttaaccggg
ggcgaagacaccgcttataaaatgttaaaagctaaccccactttagccttgagcgctgaa
acaggcggtaaaaacgccaccattgtgagcaaaatggcagacagagaccaggcgattaag
aatgttatccattcagcttttagcaattcggggcaaaaatgctccgccacttcgctttta
gtattagaaaaagaagtctatgaagatgagaactttaaaaagactctaatagatgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcgctctagcggac
aagcctaatgaaaaggtcatcaaagccatagatgaattaaaaagctatgaaaattacgaa
atcccggtaagctttgtcaatgataacccctatttgatgaagccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccattttatccgtgatg
gaagcaaaagatttagacgaagcgatagaaatagccaattctaccggttacgggctgact
agcgcgttagagtcgttggacgaaagggagtgggaatattatttagaacgcattgaagcc
ggtaatatctatatcaacaagcccaccacaggagcgattgtcttgcgccagccttttggg
ggggttaaaaaatccgctgtggggtttgggaggaaagtaggcattttcaactatatcacg
caatttgtgaatatctgccaagaagaagaagacgaaaacgccttaaaaaaccccttaagc
gaagccttagaaaacttaactcaaaaaggctatgatgagcatacgcatgagttgaagcgc
gcgatttttatggcaaaaagctacgcttatcattacaaacatgaattcagccaaactaaa
gactatgtcaaaatcagaggcgaagacaaccttttttcctacactaaagttaaaagcgtg
ggctatcgcatcaccgaaaaggacactttaagcgacatgttaggcgttgctttagcatgt
ttaatttctcaaatccctttaacgctcagcatagaaaacgaacgaacgaacaaagattta
acctttttcttagaatgcttaaaagcgctccaagcaagcgcccctattgtttatgaaagc
ttgcaaaaatttagcgagaaattgaatactttcaatcgtgtccgttatctcaaaagcgat
ttggatttattgcacgaacaagcgagcgctttagggatggttttagccacggctaaacca
tgcctaaatgggcgttttgaattgctgtattaccacttagagcgatcggttagcatctct
tatcaccgttatgggaatttaggctcaagggttttaaggcaacccacttgccacaaatca
tgctgtgctgaaaaataa

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