Herbaspirillum frisingense: G5S34_16850
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Entry
G5S34_16850 CDS
T06761
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00053
Ascorbate and aldarate metabolism
hfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
G5S34_16850 (garD)
Enzymes [BR:
hfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
G5S34_16850 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
QNB08263
UniProt:
A0A7G6AZ29
LinkDB
All DBs
Position
complement(3720060..3721628)
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AA seq
522 aa
AA seq
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MSNDIAASQATTPRYIMMNDTDNVAIVVNDGGLPAGTVFPDGLTLVDRVPQGHKIALRDL
KQGEAITRYDVAIGYAVRDIPKGSWIEESLVQMPPARELDNLPIATKKPAPQPPLEGYTF
EGYRNADGSVGTRNLLAITTTVQCVAGVVEHAVKRIRAELLPKYPNVEDVVALEHTYGCG
VAIDAPNAGIPIRTLRNISLNPNFGGQAMVVSLGCEKLQPNRLLPENMIPIHKAGEPYVV
CLQDAEHVGFNSMIDSIMKMAEARLTELDKRRRETCPASDLVVGVQCGGSDAFSGVTANP
AVGFATDLLVRAGAAVMFSEVTEVRDGIDQLTSRAVNEEVAQAMIREMDWYDNYLKQGGV
DRSANTTPGNKKGGLANIVEKAMGSIVKSGSSPISGVLAPGDKLQQKGLIYAATPASDFI
CGTLQLAAGMNLHIFTTGRGTPYGLAAVPVIKVATRNDLARRWHDLMDVNAGRIASGEAS
IEDVGWELFQLMLDVASGKKRTWAEQWKLHNALTLFNPAPVT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgatatcgccgccagccaggcaaccaccccgcgctacatcatgatgaacgac
accgacaatgtcgccatcgtcgtcaacgacggcggcctgccggccggcaccgtcttcccg
gatgggctgaccctggtcgaccgcgttccccagggccacaagatcgccttgcgcgacctc
aagcagggcgaggccatcacgcgctatgacgtggccatcggctatgcggtgcgcgatatc
cccaagggcagctggatcgaggaatcgctggtgcagatgccgccggcccgcgaactggac
aacctgcccatcgccaccaaaaagccggcgccgcagccgccgctggaaggctataccttc
gagggttatcgcaatgccgatggttcggtcggtacccgcaacctgctggccatcaccacc
accgtgcaatgcgtggcgggcgtggtggagcacgcggtcaagcgcatccgcgccgaactg
ttgcccaagtatcccaatgtggaagatgtggtggcgctggagcatacctatggctgcggc
gtggccatcgatgcgcccaatgccggcatccccatccgcacgctgcgcaacatcagcctg
aatcccaacttcggcggccaggccatggtggtcagcctagggtgcgaaaagcttcagccc
aatcgcctgctgcctgaaaacatgatccccatccacaaggccggcgagccctatgtggtg
tgcctgcaggatgcggagcacgtgggcttcaactccatgatcgattccatcatgaagatg
gccgaggcgcgcctgaccgagctcgacaagcgtcgtcgcgagacctgcccggcctccgac
ctggtggtgggtgtgcagtgcggtggcagcgatgccttctccggcgtgaccgccaacccc
gccgtgggcttcgccaccgacctgctggtgcgggccggggcggcggtgatgttctcggag
gtgaccgaggtccgtgacggcatcgaccagctgacctcgcgcgcagtcaacgaggaagtg
gcgcaggccatgatccgcgagatggactggtacgacaattacctcaagcagggcggcgtg
gaccgcagtgccaataccacccccggcaacaagaagggcggtctggccaatatcgtcgag
aaggccatgggctccatcgtcaagtccggctccagcccgatctcgggcgtgcttgcgccg
ggcgacaagctgcagcagaagggcctgatctacgccgccacgccggcctcggacttcatc
tgcggcacgctgcagctggccgccggcatgaacctgcatatcttcaccaccggccgtggc
accccctacggcctggcagcggtgccggtgatcaaggtcgccacccgcaacgacctggcg
cggcgctggcacgacctgatggacgtcaatgccggtcgcatcgccagcggcgaggccagc
atcgaggacgtgggctgggaactgttccagctcatgctggacgtggccagcggcaagaag
cgcacctgggccgagcagtggaaactgcataacgcgctgaccctgttcaatccggcgcca
gtgacctga
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