Herbaspirillum frisingense: G5S34_18955
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Entry
G5S34_18955 CDS
T06761
Name
(GenBank) arginine/lysine/ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00330
Arginine and proline metabolism
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
G5S34_18955
Enzymes [BR:
hfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
G5S34_18955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Colicin-DNase
NDUFB10
Motif
Other DBs
NCBI-ProteinID:
QNB08624
UniProt:
A0A7G6B040
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All DBs
Position
4160504..4162756
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AA seq
750 aa
AA seq
DB search
MKFRFPIVIIDEDFRSENTSGLGIRALADAIEAEGMEVLGVTSYGDLAQFAQQQSRASAF
ILSIDDEEMGAGSDEETDHALKALRAFVSEIRHKNADIPIYLYGETRTSRHIPNDVLREL
HGFIHMFEDTPEFVARHIIREAKSYLDGLAPPFFRALVDYAQDGSYSWHCPGHSGGVAFL
KSPVGQMFHQFFGERLLRADVCNAVEELGQLLDHTGPVANSERNAARIFNADHCYFVTNG
TSTSNKMVWHSTVAPGDIVVVDRNCHKSILHSIIMTGAIPVFLMPTRNHLGIIGPIPLEE
FTLESIQRKIEANPFAREAKNKKPRILTITQSTYDGVVYNVETLKDMLDGEIETLHFDEA
WLPHATFHDFYKDMHAIGKDRPRAKKSLIFSTQSTHKLLAGLSQASQILVRESETVKLDE
DAFNEAFLMHTSTSPQYSIIASCDVAAAMMEAPGGTALVEESIIEALDFRRAMKKIDQEF
GDEWWFQVWGPNSFAADGIGEREDWVIKAEDDWHGFGDLAPGFNMLDPIKATIVTPGLAL
NGQFGETGIPASIVTKYLAEHGVIVEKCGLYSFFIMFTIGITKGRWNTLVTALQQFKDDY
DKNQPIWRILPEFAQRNPRYERLGLRDLCQQIHETYRAYDVARLTTEMYLSDMQPAMKPS
DAFAKMAHREIDRVPLDELEGRVTSILLTPYPPGIPLLIPGEIFNKTIVDYLKFARDFNE
KFPGFETDVHGLVKREVNGRRDYFVDCVKQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgattccccatcgtcatcatcgacgaagacttccgctccgagaacacctcg
ggcctgggcatccgcgccctggctgacgccatcgaagccgaaggcatggaagtgctgggc
gtgaccagctacggcgacctggcccagttcgcacaacagcagtcgcgcgcctcggccttc
atcctgtccatcgacgacgaggaaatgggggccggctccgacgaggaaaccgaccacgcc
ctcaaggccctgcgcgccttcgtcagcgagatccgccacaagaacgccgacatccccatc
tatctctacggtgaaacccgcacctcgcgccacatccccaatgatgtgctgcgcgaactg
cacggcttcatccacatgttcgaagacaccccggagttcgtggcccgccacatcatccgt
gaagccaagtcctacctggacggtctggccccgcccttcttccgcgccctggtcgattac
gcccaggatggctcctattcctggcactgccccggccactccggcggcgtggccttcctg
aagtcacccgtgggccagatgttccaccagttcttcggcgagcgcctgctgcgcgccgac
gtctgcaacgccgtggaagaactgggccagctgctggaccacaccggcccggtggccaat
tcggaacgcaatgcggcgcgcatcttcaatgccgaccactgctacttcgtcaccaacggt
acctcgacctccaacaagatggtgtggcactccaccgtcgcccccggcgacatcgtggtg
gtggaccgcaactgccacaagtccatcctgcactccatcatcatgaccggcgcgattccc
gtgttcctgatgcccacccgcaatcacctgggcatcatcggaccgatcccgctggaagag
ttcaccctggaaagcatccagcgcaagatcgaagccaaccccttcgcccgcgaagccaag
aacaagaagccgcgcatcctgaccatcacccagtcgacctatgacggcgtggtctacaac
gtcgaaaccctgaaggacatgctcgacggcgaaatcgagaccctgcacttcgacgaagcc
tggctgccgcatgccaccttccacgacttctacaaggacatgcacgccatcggcaaggac
cgcccgcgcgccaagaagtcgctgatcttctcgacccagtcgacccacaagctgctggcc
ggcctgtcgcaggcctcgcagatcctggtgcgcgaatcggaaaccgtgaagctggacgaa
gatgccttcaacgaggccttcctgatgcacacctcgacctcgccgcaatattccatcatc
gcctcctgcgacgtcgccgcggccatgatggaagcccccggcggcactgcgctggtggaa
gaaagcatcatcgaggcgctcgacttccgccgcgccatgaagaagatcgaccaggagttc
ggcgatgaatggtggttccaggtctggggccccaacagcttcgccgccgacggcatcggc
gagcgcgaagactgggtcatcaaggccgaggacgactggcacggcttcggcgacctggca
ccgggcttcaacatgctggacccgatcaaggccaccatcgtcacccccggcctggccctg
aacggccagttcggcgagaccggcatcccggcctccatcgtgaccaagtacctggccgag
cacggcgtgatcgtggaaaagtgcggcctgtattccttcttcatcatgttcaccatcggc
atcaccaagggccgctggaacacgctggtgacggcactgcagcagttcaaggacgattac
gacaagaaccagccgatctggcgcatcctgcccgagttcgcccagcgcaacccgcgctac
gagcgcctgggcctgcgcgacctgtgccagcagatccacgagacctaccgtgcctacgac
gtggcccgcctgaccaccgagatgtatctctcggacatgcaaccggccatgaagccctcg
gatgccttcgccaagatggcccaccgcgagatcgaccgcgtccccctggatgaactcgaa
ggccgcgtcacttcgatcctgctgaccccgtatccgccgggtattccgctgctgatcccg
ggcgaaatcttcaacaagaccatcgtcgattacctgaagttcgcccgtgatttcaacgag
aaattccctggcttcgaaaccgacgtgcacggtctggtcaagcgcgaagtcaacggccgc
cgcgattacttcgtggattgcgtcaagcaataa
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