Herbaspirillum frisingense: G5S34_21660
Help
Entry
G5S34_21660 CDS
T06761
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00362
Benzoate degradation
hfr01100
Metabolic pathways
hfr01120
Microbial metabolism in diverse environments
hfr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
G5S34_21660 (pcaB)
Enzymes [BR:
hfr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
G5S34_21660 (pcaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
QNB09096
UniProt:
A0A7G6B1G2
LinkDB
All DBs
Position
4783500..4784876
Genome browser
AA seq
458 aa
AA seq
DB search
MSVSIFDSFLTTSEMITVFDDQAVVQAMLRFEQALAEAEAAEGVIPETAARAIASVCRAP
LYDIPALIVAGRRAGALAIPLVKELQRTVALYSEEAATHVHWGSTSQDVLDTAMVLVTRN
ALDLIDAELATLTQRLLELARSHLDTPVLARTLMQPAQVTSLGFKFCGWAAPLLRSRAQL
QTLSSHALQLQLGGAVGTLAVLDDKGPAVAARMAAALELATPEAAWHTRRDQWIRLGTEM
AVLAGSLGKIATDLSLMAQGEIAELAEPSGNGRGGSSAMPHKRNPVSSMIALAAAARAPQ
QAAALLAAMGQQHERGLGNWQAELAEWPALFLGVHGALRALNEAFAGLQIDQERMLRNID
ALQGLVFAESASIALATVIGRPRAHALLEQLTRKTVAEGGQLVDLLVAAVESDESLHKSV
DSAHLRALFDPVVATRPARRLAEQQLERMQAAQGKPPA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttccatattcgacagcttcctcaccacgtccgagatgatcaccgtcttcgac
gaccaggccgtggtgcaagccatgctgcgcttcgaacaggcgctggccgaggccgaagcc
gccgaaggcgtgattcccgagactgctgcccgcgccatcgccagcgtctgccgggcgccg
ctgtacgacattccggcactgatcgtggccggccgccgtgccggcgcactggccatcccc
ctggtcaaggaattgcagcgcacggttgcgctctacagtgaagaagccgcgacccatgtg
cactggggcagcaccagccaggatgtactggacacggccatggtgctggtcacgcgtaac
gcactcgacctgatcgacgccgaactggcgaccctgacgcagcgactgctggaactggca
cgcagccatctggacacaccggtactggcacgcaccctgatgcagccggcccaggtcacc
agcctgggcttcaaattctgtggctgggccgcgccgctgctgcgctcgcgggcgcagttg
cagaccttgtccagccatgccctgcaactgcaactgggcggtgcagtcggcacgcttgcg
gtactggatgacaaaggaccggcggtcgccgcccgcatggcggcggcactggaactggcc
acgcccgaagccgcctggcatacccggcgcgaccaatggatcaggctgggtaccgagatg
gccgtactggccggcagcctgggcaagatcgccaccgacctgtcgctgatggcgcaaggc
gagatcgccgaactggccgaaccctcaggcaacggccgtggcggctcctcggcgatgccg
cacaagcgcaacccggtctcgtccatgatcgcgctggccgccgctgcccgcgccccacag
caagccgcggcgctgctggccgccatgggacagcagcacgaacgcggcctgggcaactgg
caagccgaactggccgagtggccggccctgttcctcggtgtacatggtgccctgcgtgcg
ctcaatgaagccttcgccggcctgcagatcgaccaggagcgcatgctgcgcaacatcgat
gccctgcagggcctggtatttgccgagtcggcctccatcgcgctggccaccgtgatcggc
cgcccgcgagcacatgccctgctggaacaattgacgcgcaagaccgtggccgagggcggg
cagctggtggacctgctggtcgcggcggtggagtctgacgaatcgctgcataagtcagtg
gacagcgcgcatctgcgcgccctgttcgaccccgtcgtcgcgacccgcccggcacgccgc
ctggccgagcagcagcttgaaagaatgcaggctgcacaaggcaagccacccgcctga
DBGET
integrated database retrieval system
