Herbaspirillum frisingense: G5S34_25000
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Entry
G5S34_25000 CDS
T06761
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hfr03016
]
G5S34_25000 (mnmC)
Enzymes [BR:
hfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
G5S34_25000 (mnmC)
Transfer RNA biogenesis [BR:
hfr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
G5S34_25000 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
NAD_binding_9
Pyr_redox_2
Lycopene_cycl
3HCDH_N
FAD_binding_2
HcgC
TrkA_N
HI0933_like
GIDA
Motif
Other DBs
NCBI-ProteinID:
QNB09702
UniProt:
A0A7G6B368
LinkDB
All DBs
Position
complement(5499349..5501271)
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AA seq
640 aa
AA seq
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MPACSLQPASPELLAAWRADAVQAALGPVAIPDCLSEQSTAVVLDLHFGLGHAFFATWHA
FARQRAQGPVQRLHYIAILPHPPTAEALHSDLTYAQALREAWPLPLPGTHRLLLDEGRVV
LTLIWGALEEELARLEAPVDLFYLHADPQRFDAAAPPWHAHACKRLARLACSGAQAMVWG
IDEAAAAALTAAMRQVGFSVHPRGPLGDDVLTLRYAPMWARPASHVATSDTPLQRHPRQP
RHALVIGAGLAGTAIAERLAARGWRIDLVDAGPDVATRASGNHGGLFMPALARDDSPLAR
LTRAAFLFAAQRWQALGGVGLEEGAAITGECCGILQFGRDAKQAWSFEQGAQQWQYPARY
ARWMSAADTAAALGMPTMGGGYFFPEAGWLHPPSVCRRLLAQASSHGQLATHFGRAVARL
QRKDENGQWQAQAADGSVIAQAPVVILAAGAQARALTQAADLPLNAVRGQVTHLPAQGFP
DLPYALCGDGYLTRPYAGQVCMGASYDRFDDPALRVDSHADNLDRLRHMLPQIDQHLGQP
GLPDATDPDLGGRVGQRCIAPDRLPLVGALPGQDPGLYGLLGYASRGLIWAPLMAELLAS
MIEREPLPLPRDLVVALDPARFAGLSAGAFDAINAPSDPE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctgctccctccaacctgcctccccggaattgctggccgcctggcgtgccgac
gccgtgcaagctgcgctcggcccggtggcgatccctgactgcctgagcgagcagtccacg
gccgtggtgctggacctgcatttcggtctgggccatgcctttttcgccacctggcatgcc
ttcgcacgacagcgggcgcaggggccagtgcagcgcctgcattacatcgccatcctgccg
cacccgccgacggcggaggccctccattcagatttgacttatgcacaggccttgcgcgaa
gcctggcccttgccgctgccaggcacgcaccggttgctgctggacgagggcagggtggtg
ctgacactgatctggggcgcactggaagaagagctggcgcggctggaggcgccagtcgat
ctgttctacctgcatgccgatccgcagcgcttcgacgccgctgcgccgccctggcacgcg
catgcctgcaaacggctggcgcgcctggcgtgtagcggcgcccaggccatggtgtgggga
atcgatgaggcagcggctgcggccttgacggcggcgatgcgccaggtcggcttttccgtt
cacccgcgtggcccgcttggtgacgacgtattgaccttgcgctacgcgccgatgtgggcg
cgcccggcttcgcatgtggccaccagcgatacaccgttgcagcgtcacccgcgccagccc
cgccatgcactggtgatcggcgccggcctggccggcacggccatcgccgaacgtctggcc
gcgcgtggctggcgcatcgatctggtggatgccgggccggacgtggccacgcgtgcttcc
ggcaatcacggcggtctcttcatgcccgcgttggcacgcgacgacagtccgctggcgcgc
ctgacgcgtgcggccttcctgttcgcagcgcaacgctggcaggcactggggggcgtgggc
ttggaggagggcgcggccatcaccggtgaatgctgcggcatcctgcagttcgggcgcgat
gccaagcaggcctggtccttcgaacagggggcgcagcaatggcagtaccctgcccgttat
gcacgctggatgtcggcggccgacacggctgctgcactgggcatgccgaccatgggtggg
ggctatttctttccggaagcgggctggttgcatccgccttcggtgtgccgccgcctgctg
gcgcaggccagttcacacggacagctcgccacccacttcggtcgcgccgtggctcgcctg
cagcgcaaggacgagaacgggcagtggcaggcgcaggccgcagacggcagcgtgatcgcc
caggcgccggtggtgatcctggcagccggtgcacaggccagggcgctgacccaggcggcc
gacctgccactgaacgcggtgcgcggccaggtcacgcatctgccggcgcaaggctttccc
gacctgccgtacgccctgtgcggtgacggctacctgacccggccctacgccgggcaagtc
tgcatgggtgccagctacgaccgcttcgacgatcccgccttgcgggtcgacagtcatgcc
gacaatctcgaccgtctgcgccacatgctgccgcagatcgaccagcaccttgggcagccg
gggctgccggatgccaccgatcccgacctgggcgggcgggtcggtcagcgctgcatcgcg
cccgaccggctgccgctggtgggagcactgccggggcaggatccggggctctacggtttg
ctgggctatgcgtcgcggggcctgatctgggcaccgctgatggcggaactgctggcgtcg
atgatcgagcgcgagcccttgccgctgccgcgtgatctggtggtggcgctggacccggcc
cgttttgcgggcttgtcagccggtgcgttcgacgcgatcaacgcgcccagtgacccggaa
tga
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