Haloferax gibbonsii: ABY42_01360
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Entry
ABY42_01360 CDS
T04025
Name
(GenBank) isopentenyl pyrophosphate isomerase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hgi
Haloferax gibbonsii
Pathway
hgi00900
Terpenoid backbone biosynthesis
hgi01100
Metabolic pathways
hgi01110
Biosynthesis of secondary metabolites
Module
hgi_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ABY42_01360
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hgi01006
]
ABY42_01360
Enzymes [BR:
hgi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ABY42_01360
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ABY42_01360
2.5.1.29 geranylgeranyl diphosphate synthase
ABY42_01360
Prenyltransferases [BR:
hgi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ABY42_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AKU06455
UniProt:
A0A0K1IQ67
LinkDB
All DBs
Position
complement(252678..253520)
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AA seq
280 aa
AA seq
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MEYLERRVTMVNDRLEEVVSAVEPSELADQLDHVALAGGKRVRPAVTILACEAVGGTPED
AVDFAVGVELVHNASLVVDDIIDRSDIRRGTPSAWAEYGYGPAIIASDGLLGEAFALLSS
SDRATRIVAESMVELGEGEATELVAVPSNEDEYMQLAHRKTGALFRAAAELGAVAAGGDA
HVVEAFGDYAARVGVAFQIRDDVLDATADAEELGKPTGQDAEMGRPSLVQVTDLTPEEAN
RRARQQADEALSALDSSGVEDSEPLEYLRDLAEFVIVRES
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaatacctggagcgccgggtcacgatggtaaacgaccgcctcgaggaggtcgtctcg
gcggtcgagccgtcggaactcgccgaccaactcgaccacgtcgctctcgcggggggcaag
cgcgtccgccccgccgtgaccatcctcgcctgcgaggccgtcggtggcacccccgaggac
gccgtcgacttcgcggtcggcgtcgaactcgtccacaacgcctcgctcgtcgtcgacgac
atcatcgaccggtccgacatccgccgcggcacgcccagcgcgtgggccgagtacggctac
ggcccggcaatcatcgcctccgacggcctgctcggcgaggcgttcgccctcctctcgtcg
tcagaccgcgccacccgcatcgtcgccgaatcgatggtcgaactcggcgagggcgaggcg
accgaactcgtcgcggtcccgtccaacgaagacgagtacatgcagctcgcccaccgcaag
acgggcgcgctgttccgcgccgccgccgaactcggcgccgtcgccgccggcggcgacgcc
cacgtcgtcgaggcgttcggcgactacgcggcccgcgtcggcgtcgccttccagattcgc
gacgacgtgctggacgccacggccgacgccgaggaactcggcaagccgacgggacaggac
gccgagatgggccggccgtcgctcgtacaggtgacggacctgacccccgaggaagcgaac
cgccgggcccgacagcaggccgacgaagcgctttcggccctcgactcctcgggcgtcgaa
gactcggagccgctggagtacctccgcgacctcgcggagttcgtcatcgtccgcgagagc
tga
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