Heterocephalus glaber (naked mole-rat): 101698350
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Entry
101698350 CDS
T02812
Symbol
Cdkal1
Name
(RefSeq) CDK5 regulatory subunit associated protein 1 like 1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hgl03016
]
101698350 (Cdkal1)
Enzymes [BR:
hgl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
101698350 (Cdkal1)
Transfer RNA biogenesis [BR:
hgl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101698350 (Cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
101698350
NCBI-ProteinID:
XP_012928723
LinkDB
All DBs
Position
Un
AA seq
578 aa
AA seq
DB search
MPSASCDMLLDDIEDIVSQEDSKPQDRHFARRHVVPKVRRRNTQTYLQEESSPPRDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYTITENPSEADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACAYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGTSLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCMADFKRVVDFLKKKVPGITIATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPTQVKKQRTKDLS
RVFHSYNPYDHKIGEKQKVLVTEESFDSKFYVAHNQFYEQVLVPKNPSFMGKMVEVDIYE
SGKHFMKGLPVLDAKVYTPSISKPLAKGEVSGLTKEFRNRLGIHPNLTSHTPAATLHNSA
SSRMGLQLQRLHQDCVLRAAVGLALVALLFTIFTKMCS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgatatgctactggatgacatagaggatattgtgtcacaggaa
gattcaaagccacaagatagacattttgcaagaaggcatgttgttccaaaggtgcgaaga
agaaatacccaaacatatttgcaagaggaaagcagtccaccaagggatagcactattcca
ggcatacagaaaatttggatacgaacatggggctgttcacataataattcagatggagaa
tatatggctggacagctagctgcttatggctatacaattacagaaaatccatctgaagca
gatttgtggctcctgaacagttgtactgtaaaaaacccagctgaagaccactttagaaac
tcaattaaaaaagctcaagaggaaaacaagaaagtagtgctggccgggtgtgtccctcaa
gcccagcctcgtcaggattacctcaagggactgagtatcattggggttcaacagatagat
cgtgtggttgaagttgtagaagaaacaattaaaggtcactctgtgagactgctgggtcag
aagaaggataatggaaagcggttggggggagctcgattggatttgccaaagattaggaag
aatccactgattgaaatcatttccatcaatactgggtgtctcaatgcttgtgcctactgc
aaaactaaacatgccagaggaaatttggccagttatcccattgatgagctagtggataga
gccaaacagtctttccaagagggtgtttgtgagatatggctgaccagtgaagacacaggg
gcctatggcagagacatcggcaccagtctgcccacgctcctgtggaagctggtggaagtg
attcctgagggagcaatgctgaggcttggcatgacaaatccgccctatatcttagagcat
ctggaggaaatggcgaaaatcctcaatcatccccgagtctatgctttcctacacatccca
gtccagtctgcctctgacagtgtgctcatggaaatgaagagagaatactgcatggctgac
ttcaaaagagtagtggattttctgaaaaagaaagttcctggaataactattgccacagat
attatctgtggttttcctggagaaacagatcaggattttcaagaaacagtgaaactcgtt
gaagagtacaaatttccaagcctcttcattaaccaattttacccaagaccaggaactcct
gctgcaaaaatggaacaagttccaacacaagtgaaaaagcaaaggacaaaagatctgtct
cgggtatttcattcttacaatccttatgatcacaagattggtgaaaaacaaaaagtgtta
gtaacagaagaatcttttgattccaagttttatgttgcacacaatcaattttatgagcag
gttttagtgccaaagaacccttcattcatggggaaaatggtcgaggtggacatttatgaa
tcaggaaaacattttatgaaagggctgccagtattggatgccaaagtatacacgccatcc
atcagcaaaccattagcaaagggagaagtctcaggtttaacaaaggaattcagaaatagg
cttgggattcacccgaatctgacatcccacacccctgctgcaactctgcacaactcagca
agttcccgaatggggctgcaactgcaaaggttacatcaagactgtgtgttgagggcagcc
gtgggcttggctctcgtggctctgcttttcaccatttttaccaagatgtgttcctga
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