Heterocephalus glaber (naked mole-rat): 101725534
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Entry
101725534 CDS
T02812
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04064
NF-kappa B signaling pathway
hgl04514
Cell adhesion molecules
hgl04668
TNF signaling pathway
hgl04670
Leukocyte transendothelial migration
hgl04933
AGE-RAGE signaling pathway in diabetic complications
hgl05143
African trypanosomiasis
hgl05144
Malaria
hgl05417
Lipid and atherosclerosis
hgl05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101725534 (Vcam1)
04668 TNF signaling pathway
101725534 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101725534 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101725534 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
101725534 (Vcam1)
05143 African trypanosomiasis
101725534 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101725534 (Vcam1)
05418 Fluid shear stress and atherosclerosis
101725534 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101725534 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hgl04090
]
101725534 (Vcam1)
04091 Lectins [BR:
hgl04091
]
101725534 (Vcam1)
CD molecules [BR:
hgl04090
]
Proteins
101725534 (Vcam1)
Lectins [BR:
hgl04091
]
I-type lectins (Siglecs)
101725534 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
C2-set
Ig_2
V-set
ICAM_N
Ig_4
C2-set_2
Ig_6
ICAM1_3_5_D2
Ig_5
TrkA_C
DUF2140
Motif
Other DBs
NCBI-GeneID:
101725534
NCBI-ProteinID:
XP_004869192
UniProt:
G5AYQ4
LinkDB
All DBs
Position
Un
AA seq
742 aa
AA seq
DB search
MPGKIAMIFGVSNILWIVFAASQAFKIETSPESRILAQIGDSISLTCSTTGCESPSFSWR
TQIDSPLNAKVRNEGTKSTLTMDPVSFENEHSYLCTATCGSRKEEKEIQVDVYSFPKDPE
IHFSGLLEVGKPIIVKCLVPDVYPFDRLEMELLKGDSHLKNQEFLEDMDKKSLETKSLEV
TFTPTIEDIGKALICRAKLHITETDSEESNPKEKETNKELQVYISPKNTAISVQPSTRLQ
EGDSVTLTCSSEGLPAPESVWSKKLDNGNLQLLSGNATLTLIAMKMEDSGIYVCEGVNQI
GRNRKEVELIVQEKPFTVDISPGHQVAAQVGDSIVLTCSVTDCESPSFSWRTQRNSSLSG
MVRIVRTESTVNLSSVSLENEDQYLCTVTCGHRKVEKEIQVELYSFPQDPEIEMSDLLVS
GNPVTVSCKVPFVYPFDHLEIEIRKGETLMVNKYFSEEMDIKSLKNHSLEMTFTPTTEDT
GNVLVCQAKLHIGEMESEPKQRQSTQTLYVNVAPTDTTVLFNPSSILEEGSSVNMTCSSN
GIPAPKILWSRQLSNGDLQLLSETTTLTLISTKMEDSGIYVCEGINQAGISRKKVELTIQ
VAPKDIQLTAFPSESVKEGDMVIISCTCGNVPETWIILKKKTEMGDTVLKSIDGAYTIHK
VQLEDAGVYECESKNKVGSELRSLTLDVKGRENNKDYFSPELLVLYCTFSLIIPAFGMII
YFARKANMKGSYSLVEAQKSKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatagccatgatctttggagtttcaaatatactttggatagtgtttgcg
gcctctcaggcttttaaaattgagacctccccagaatcccggattcttgctcagataggt
gactccatctcactgacttgcagcaccacaggctgcgagtccccatctttctcttggaga
acgcagatagacagtccgctgaatgccaaggtgaggaatgaaggcaccaagtccacgctg
accatggatcccgttagtttcgagaatgaacactcctatctgtgcacagcaacttgcgga
tccaggaaggaggaaaaagaaatacaggtggatgtctactcttttcccaaggatccagag
attcatttcagtggccttctggaggtcggaaagcccatcatagtcaagtgtctggtccct
gatgtgtacccatttgacaggctggagatggagttactgaagggtgactcccatctgaag
aatcaggaatttctggaagatatggacaagaagtccttggaaaccaagagtcttgaagta
acctttactcctaccattgaagatattggaaaagcactcatttgccgagctaaattgcac
attactgaaactgattctgaagaatcaaatcccaaagaaaaggagactaacaaagaactg
caagtctacatctcacccaagaacacagctatctctgtgcaaccctccacgaggctgcaa
gagggtgactctgtgactctgacgtgttccagtgagggtctaccagctcctgagagtgtc
tggagcaagaaattagacaatgggaatctacagcttctttcagggaatgcaactctcaca
ttaattgccatgaaaatggaagattctggaatttatgtctgtgaaggagtcaatcagatt
gggagaaacagaaaagaggtggaattaattgttcaagagaaaccatttactgtcgacatc
tcccctggacaccaggttgctgcccaggttggggactcaattgtgttgacatgtagtgtc
acagattgtgagtccccatctttctcttggagaacccagagaaacagctctctgagtggg
atggtgcggattgtgaggactgagtccacagtgaacttgagctctgtgagtttagagaac
gaagatcaatacctatgcacagtgacatgtggacacagaaaagtggaaaaggaaatccag
gtggagctctactcattccctcaagatccagaaattgagatgagtgatctactagtgagt
gggaatcctgtcactgtaagctgcaaggttccttttgtgtatccttttgaccacttggag
attgaaatacgtaaaggagaaactcttatggtgaataaatacttttcagaggaaatggac
ataaaatccctaaagaaccacagtttggaaatgaccttcactcccaccactgaagatact
ggaaatgtgcttgtttgtcaagcgaagttacatattggtgaaatggaatctgaacccaaa
caaaggcagagtacacagacactttatgtcaatgttgcccccacagataccactgtcttg
ttcaacccctcctctatcttagaggaaggcagttctgtgaatatgacatgcagtagtaac
ggcattccagctccaaaaatcctgtggagcagacagctcagtaatggagatctacagctt
ctttctgagactaccacactcaccttaatttccacaaaaatggaagattctggcatttat
gtgtgtgaagggattaaccaggctggaataagcagaaaaaaagttgaactaactatccaa
gttgctccaaaagacatacaacttacagcttttccttctgagagtgtcaaggaaggagac
atggtcattatctcttgtacatgtggaaatgttccagaaacttggataattctgaagaaa
aaaacagagatgggagacacagtgctaaagtctatagatggtgcatacaccatccacaag
gtgcagctggaggatgcaggagtatatgaatgtgaatctaaaaataaagttggctcagaa
ttaagaagcctaacgctggatgttaaaggaagagaaaataataaggactatttttccccc
gaacttcttgttctctactgtacattctccttaataatacctgccttcgggatgatcatt
tactttgcaagaaaagccaacatgaaaggatcatacagtctggtagaagcacagaaatca
aaagtgtag
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