Heterocephalus glaber (naked mole-rat): 101725588 Help Entry 101725588         CDS       T02812                                  Symbol Polr2a Name (RefSeq) RNA polymerase II subunit A   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl03020   RNA polymerase hgl03420   Nucleotide excision repair hgl05016   Huntington disease Brite KEGG Orthology (KO) [BR:hgl00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     101725588 (Polr2a)   09124 Replication and repair    03420 Nucleotide excision repair     101725588 (Polr2a)  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     101725588 (Polr2a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hgl03021]     101725588 (Polr2a)    03400 DNA repair and recombination proteins [BR:hgl03400]     101725588 (Polr2a) Enzymes [BR:hgl01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      101725588 (Polr2a) Transcription machinery [BR:hgl03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      101725588 (Polr2a) DNA repair and recombination proteins [BR:hgl03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       101725588 (Polr2a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_R RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  101725588 NCBI-ProteinID:  XP_004857483 UniProt:  G5B5C5 LinkDB All DBs Position Un AA seq 1970 aa AA seqDB search MHGGGPPSGDSACPLRTIKRVQFGILSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN NT seq 5913 nt NT seq  +upstreamnt  +downstreamnt atgcatgggggtggccccccttccggggacagcgcatgcccgctgcgcacaatcaagaga gtacagttcgggatcctgagtccggatgaactgaagcggatgtctgtgacagagggtggt atcaaatacccagagacaactgagggaggtcgccccaagcttggggggctaatggatcca aggcagggggtgattgaacgaactggccgctgccaaacatgtgcaggaaacatgacagag tgtcctggccactttggccatattgaactagccaagcctgtatttcatgtgggcttcctg gtgaagacaatgaaggttttgcgctgtgtctgtttcttctgctccaaactgcttgtagac tccaacaacccaaagatcaaagacatcctggccaaatccaaggggcagcccaagaagcga ctcacacatgtctacgacctttgcaaaggcaaaaacatctgcgagggtggggaggaaatg gacaacaagttcggtgtggagcagcctgagggtgatgaagatctgaccaaagagaagggc catggcggctgtgggcgataccagcctcggatccggcgctcgggcctggagctgtatgct gagtggaagcatgttaatgaggactctcaggaaaagaagatcctcctgagtccggagcga gtgcatgaaatcttcaaacgcatctcagatgaggaatgttttgtgctgggcatggagccc cgctatgctcggcctgaatggatgattgtcacagtgctgccagtgccccccctctctgtg cggcctgctgtggtgatgcagggctctgcccgaaaccaggatgacttgacacacaaattg gctgacattgtgaagatcaataatcagttgcggcggaatgagcagaatggtgcagcagct catgttattgcagaggatgtgaagcttctccaattccatgtggccactatggtggacaat gagctgcccggcttgccccgtgccatgcagaagtctggccgtccccttaagtccctgaag cagcggctgaagggcaaggaaggccgggtgcgagggaacctgatgggcaaacgagtggac ttctcagctcgtactgtaatcacccccgaccccaacctgtccattgatcaggttggcgtg ccccgctccattgccgccaacatgacctttgcagagattgtcacccctttcaacattgac agacttcaggaactggtgcgcagggggaacagccagtacccgggggccaagtacatcatc cgagacaatggtgatagaattgacttgcgtttccaccccaagcccagtgaccttcacctt cagactggctataaggtggaacggcatatgtgcgatggggacattgttatcttcaaccgg cagccaactttgcacaaaatgtccatgatggggcatcgagtccgcatcctcccatggtct acttttcgtttgaatcttagtgtgacaactccatacaatgcagattttgatggagatgag atgaacttgcacctgccacagtctctggagacgcgagcagagatccaggagctagccatg gtgcctcgcatgattgtcaccccccagagcaatcgacctgtcatgggcattgtgcaggac acgctcacagctgtgcgaaaattcactaagagggatgtcttcttggaacggggtgaagtg atgaacttgctaatgtttctatccacgtgggatgggaaggtcccacaaccagccatcctc aagccccggcccttatggacaggcaaacagatcttctccctcattatccctggccacatc aattgtatacgtactcacagtacccatcctgatgatgaggacagtggcccttataaacac atctctcctggggacaccaaggtggtggtagagaatggggagctgatcatgggcatccta tgtaagaagtctctgggtacctcagctggctccctcgtccacatctcctacctagagatg ggtcatgacattactcgccttttctattcaaacatccagactgtcattaacaattggctc ctcattgagggtcataccattggcattggggactccattgctgattctaagacttaccag gacattcagaacactattaaaaaggccaaacaggatgtaatagaggtcattgagaaggct cataacaatgagctggaacccaccccagggaacacactgcgtcagacgtttgagaatcaa gtgaatcgcattctcaatgatgccagagacaagactggctcctctgcccagaaatccctg tctgaatacaacaacttcaagtctatggtggtgtccggagctaagggttccaagatcaac atctcccaggtcattgctgttgttggacagcagaatgtggagggcaagcggatcccattt ggatttaagcaccggactctgcctcacttcatcaaggatgattatgggcctgagagccgt ggctttgtggagaactcttacctggccggcctcacacccactgagttcttcttccatgcc atggggggtcgtgaagggctcattgacacagctgtcaagactgctgagactgggtacatc cagcgacggctgatcaagtccatggagtcagtaatggtgaagtatgatgcaactgtgcga aactccatcaatcaggtggtgcagctacgttacggcgaggacggcctggcaggggagagt gttgagttccagaacctggctacgcttaagccttctaacaaggcttttgagaagaagttc cgctttgattacaccaatgagagggcccttcggcgcactctgcaagaggatctggtaaag gatgtgctgagcaatgcacatatacagaatgaactggaacgggaatttgaacggatgcgt gaggatcgggaggtgctcagggtcatcttcccaactggtgacagtaaggttgtccttccc tgcaaccttctacgaatgatctggaatgcccagaaaatcttccacatcaaccctcgcctt ccctctgacctgcaccccatcaaagtggtagagggagtcaaagaattgagcaagaagctt gtgattgtgaatggggatgacccactaagccgccaggctcaggagaatgccacactgctc ttcaacatccacctgcggtccacgctgtgctcccgccgaatggctgaggagtttcggctc agtggggaggcctttgactggctgcttggggagattgaatccaagttcaaccaagctatt gcccatcctggggaaatggtgggagctctggctgcacagtcccttggggaacctgccact cagatgaccttgaacaccttccactatgctggtgtgtctgccaagaatgtgacactgggt gtaccccgacttaaggagctcatcaacatttccaagaagccaaagaccccatcactcacg gtcttcctgctgggccagtctgctcgagatgctgagagggccaaggacattctgtgccgc ctggagcatacaacattgaggaaagtgactgccaatacagccatctactatgaccccaac ccccagagcacagtggtagcagaagatcaggagtgggtgaatgtctactatgaaatgcct gactttgatgtggcccgaatctccccctggctcttgcgggtggagctggaccggaaacat atgactgaccggaagctgaccatggaacagattgctgaaaagatcaatgctggttttggc gatgacttgaattgcatctttaatgatgataatgcagagaaactagtcctccgtatccgc attatgaacagtgatgaaaacaagatgcaagaggaagaggaggtggtggacaagatggat gatgacgtcttcctgcgctgcatcgagtccaacatgctgacagatatgaccctgcagggc atcgagcagatcagcaaggtgtacatgcacttgccacagacagacaacaagaagaagatc atcatcacagaggatggggagttcaaggccctgcaggagtggatcctagagacagacggc gtgagcttgatgcgtgtgctgagtgagaaagatgtggaccctgtgcgcaccacatccaat gacattgtggagatcttcacggtgctgggcattgaggctgtgcggaaggctctggagcgg gagctgtaccatgtcatctcctttgatggttcctacgtcaattaccggcacttggctctc ttgtgcgataccatgacctgtcgcggccacttgatggccatcacccgacatggggtcaac cgccaggacactggaccacttatgaagtgttcctttgaggaaacggtggatgtgcttatg gaagcagctgcccatggggagagcgaccccatgaagggagtctctgagaacatcatgctg ggccagctagctccagcaggcactggctgttttgacctcttgttagatgcagagaagtgc aagtacggcatggagatccccaccaacatccctggtttgggggctgctggacccactggc atgttcttcggctcagcgcccagccccatgggaggaatctctcctgccatgactccctgg aatcagggtgcaaccccagcgtatggtgcctggtccccaagtgttgggagtggcatgacc ccaggggcagctggcttctctcccagtgcagcttcagatgccagcggcttcagcccaggt tactcccctgcctggtctcccacaccaggctctccaggctcacctggcccctcaagtcca tatatcccttcaccaggtggtgccatgtcacccagctactcgccaacatcacctgcctat gagccccgctcccctgggggttacacaccccagagtccctcatactctcccacttcgcct tcctactctccaacctctccatcctattctccaaccagtcctaactatagccccacatcc cctagctactcccccacctctcccagctactcaccaacatctcctagttattctccaacc tctcccagctattcaccgacctctcccagctactccccaacatcccccagctactccccg acatcccccagctactccccaacctctcccagctactccccgacgtctcccagctactcc ccaacatctcccagctactccccaacttcacccagctattcccctacctcccccagctat tcaccaacatctcctagctactcacctacatctccaagttactcaccaacttccccaagt tactcacccaccagtcctaactactctccaaccagtcccaattacaccccaacatcacca agctacagcccaacgtcacctagctattcacctactagtcccaattataccccaactagc cctaactacagcccaacctctccaagctactccccaacttcgcccagctactcaccaacc tcaccaagctattctccctcaagcccacggtacacaccacagtctccaacctatacccca agctctcccagctacagccccagctctcccagctacagcccaacttcacccaagtacacc ccaaccagtccatcctacagccctagctcaccagagtacaccccaacctcccccaaatac tcacctaccagccccaagtattcacccacttctcccaagtactctcctaccagccccacc tattcacccaccacccctaaatactcaccaacatctcctacgtactcaccaacatctcca gtctataccccaacctcacccaagtattcacctactagccccacatactctcccacttcc cccaagtactcccccaccagccctacctactctcccacctcccccaagggatctacctat tcccccacttctccaggctactccccaaccagccccacctatagcctcaccagcccagcc atcagcccggatgacagtgatgaggaaaactga

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