Halomicronema hongdechloris: XM38_018410
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Entry
XM38_018410 CDS
T04928
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhg03009
]
XM38_018410 (rimO)
Enzymes [BR:
hhg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
XM38_018410 (rimO)
Ribosome biogenesis [BR:
hhg03009
]
Prokaryotic type
ribosomal protein modification factors
XM38_018410 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
ASC70893
UniProt:
A0A1Z3HKS0
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All DBs
Position
1942006..1943325
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AA seq
439 aa
AA seq
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MDHKPTIAFTHLGCEKNRVDTEHMLGLLVQAGYPVDANEALADYVIVNTCSFIEAAREES
VRTLVELAEANKKLVVTGCLAQHFQSELLEELPEAVALVGTGDYHQIVQVIEQTEAGERV
KAISAKPTYIADETVPRYRTTTESVAYLRIAEGCNYRCAFCIIPHLRGDQRSRPIESIVA
EAHQLAAEGVKEICLISQITTHYGVDIYGRPRLADLLRALGDVDVPWIRIHYAYPTGLTE
EVIAAIQATPNVLPYLDLPLQHSHPDILRAMHRPWQGHVNDTVIERLQTALPEAVLRTTF
IVGFPGETDTHFQHLMDFVHRHEFDHVGVFTFSPEVGTVAHDLPNQVPEAIKAARREQLM
LLQQPISCRRNQAQINQIVEVLIEQQNPATGKSIGRSPRFAPDVDGLVYVSGPTCLGQQV
PVHIEAADTYDLFGTVVMS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaagccaacgattgcctttactcaccttggctgtgagaaaaatcgagtcgat
acagagcacatgctgggattactcgtgcaggcagggtatcccgtcgatgccaatgaagca
ctggccgattatgtcattgttaacacctgcagtttcatcgaagctgcccgcgaagagtcc
gtccggaccctagtggagctagccgaagccaataagaagcttgtcgtcaccggttgccta
gctcagcattttcaatcggagctactagaagagttacctgaagccgttgccctagtgggc
actggtgattaccaccaaatcgtgcaagtcattgaacagactgaagccggagaacgggtc
aaggcaatttctgctaagcccacctatattgccgacgaaacggttccccgctatcgcacc
actaccgagagtgttgcctacctgcgcatcgctgaaggctgtaactatcgctgtgccttt
tgcatcattccccatttgaggggagatcagcgctctcgcccgatcgagtccatcgtcgct
gaggcccaccaactagcagcggaaggagtaaaggaaatctgcctgatctcccagattacg
acccactatggcgtcgatatctacggtcgtcctcgcttagccgatctgctgcgggcgctg
ggcgacgtcgatgttccctggattcgcattcattacgcctatcctaccgggttaacagag
gaggtcattgctgccattcaagcaactcccaacgtattgccctacctagatctaccctta
caacactcccaccccgacatcttgcgggccatgcatcggccttggcaaggccatgtcaac
gacactgtgattgaacggctccaaactgctctgccagaagctgtcctcagaaccacattt
atcgtcggattccctggggaaaccgacacccatttccaacacctgatggacttcgttcac
cgccatgagttcgatcacgtgggcgtatttaccttttcccccgaggttggcaccgttgcc
catgaccttcccaatcaggtgcccgaagcgattaaggcagcgcgacgagaacaattaatg
ttgctgcagcaaccgatttcctgccgccgtaatcaagcccaaattaatcaaattgttgag
gttctaatcgagcagcaaaaccctgccacgggcaaatctatcggtcgttctcctcgattt
gcccctgatgtggatggcttagtctatgtgagcggaccgacctgcctgggacaacaggtg
cccgtccatatagaagccgccgatacctacgatctattcggcactgtggtgatgtcctga
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