Hippoglossus hippoglossus (Atlantic halibut): 117753629
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Entry
117753629 CDS
T07778
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117753629 (trdmt1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
117753629 (trdmt1)
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117753629 (trdmt1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
117753629
NCBI-ProteinID:
XP_034427720
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All DBs
Position
20:239762..253072
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AA seq
386 aa
AA seq
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MCTMESLRVLELYSGIGGMHYALKESGIPGQVVAAVDINTTANQIYRHNFPDTPLWNKTI
EGIPLDDFNKLSFDMILMSPPCQPFTRIGLQGDIHDLRTKSFLYILDVLPRLHRLPRFIL
LENVKGFETSSARNILVKTLMECGYTFQEIMVSPTSVGIPNSRLRYFLIAKLATNNLSTQ
TKISDAHLHPSEYDSSELPTDLYPTHTSTCQPEEDLQGGHVLYKLETATDVQRKMIQNNN
LSVRQIQDFLEPQMEANLENFLLPPKTLLRYALLLDIVQPSSRRSVCFTKGYVRYVEGTG
SVLTSCMETEMEHAFTHLDQCSEEEKLKRLMKLKLRYFTPREVANLMGFPQSFCFPEQIS
TRQKYKALGNSLNVVVVTKLLQTLLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccatggagagtttgcgtgtgctcgagctctacagtggaataggagggatgcat
tatgcattaaaggagagtggcatacctggccaggtggtggctgctgtcgacataaacacc
actgccaatcagatctacaggcacaatttccctgacaccccgctctggaacaagacaata
gagggcataccactagatgactttaataaattatcttttgacatgattttgatgagccct
ccttgccaacctttcaccaggataggtcttcagggtgacattcatgacctcagaaccaag
agcttcctctacatcctcgatgttttgccaaggctgcacaggctgccccgcttcattctg
ctggagaacgtgaaaggctttgagacttcctctgccaggaatattttggtgaaaacactg
atggagtgtggatatactttccaggagatcatggtctcacccacaagtgttgggattcct
aattcaagattgcgttatttcctgattgctaagcttgcaacaaataacttaagcacccag
acaaagatttcagatgcccacctacatccctctgagtatgattcgtctgagctgcccaca
gacttgtatccgacccacacaagtacctgccagccagaagaggacttgcaggggggtcat
gtcctgtataaactggagacagcaactgatgtgcagcggaaaatgattcagaacaacaat
ctgtctgtcaggcagatccaagacttcctggaaccacagatggaagcaaacttggagaac
tttctccttcctcctaaaaccctactgcgatatgctctgctcttagacattgttcagcct
tcatccaggaggtctgtctgctttaccaaaggctatgtacggtatgtggaaggaactggc
tcagtactgacaagctgtatggaaacagagatggagcatgcgtttactcatctggaccag
tgctctgaagaagaaaaactcaagcggctaatgaaattgaagctccgatattttactcca
agagaagttgccaacctcatgggtttccctcagagcttctgctttccagaacaaatctca
accaggcagaagtacaaagctctaggaaacagcctgaatgttgtggtggtgaccaaactc
ttacaaacgctactctcctag
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