Hippoglossus hippoglossus (Atlantic halibut): 117766314
Help
Entry
117766314 CDS
T07778
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04020
Calcium signaling pathway
hhip04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117766314 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117766314 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117766314 (grin2aa)
Ion channels [BR:
hhip04040
]
Ligand-gated channels
Glutamate (ionotropic)
117766314 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117766314
NCBI-ProteinID:
XP_034449105
LinkDB
All DBs
Position
8:18249326..18384530
Genome browser
AA seq
1548 aa
AA seq
DB search
MKWFGRMSLSSKRSKRRSRRSSSWSSSSSGRNSALLSLALLVVVTLFADPVVAQKQRTGG
ASDKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCDLM
SGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGAS
IQQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITLDAVE
EDSRSQIMLKKVQSPVVLLYCSKDEAVIILDEARSLGLTGFGYIWIVPSLTTGNPDITPE
DFPSGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEYGDIPEAKTSCYGPMEKTSKL
PPSALHKYMMNVTWDGRDLSFTEDGYQEFPKLVVIVLNKEREWEKMGKLDNRSLTLKYPV
WPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGG
TYIKKCCKGFCIDILKKIATYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAV
GSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVT
AMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKF
IVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGS
TERNIRKNYPAMHQYMVKYHQTGVVDALPWQLKAGKLDAFIYDAAVLNYMAGRDEGCKLV
TIGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVM
SSQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSGTPGLLFSISRGIW
SCIHGVHIDMKKKTDMDFSPQDKMLKLIKSAKQMTNMSNLAGSRLNSPKREFMHSAGPMI
MDMMAEKGNFIYADNRSYAPKDMIYGDTGDLQAYLANRHKDHLNNYIFQGGQHPLTLNDA
NPNTVEVAVSADSVQTNAKPPRTLWKKSVDTLRSVPPGPPPMPDMLMPDPRMSMKTQRYL
PEDTAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRAVTSKYPRDCSEVELSYLKTKQV
PGSTNQTGRGGGGEKIYTIDSDREMSLHSDPVLYRESRGLAADDLEYPEIYSDHSDNYRK
CEQPIIHLNSSPLHHTDSDLLPDPAYSKHYNLKEKNMSAHESMDRYKQTHCRSCLSKVTA
SYPPAGSYPPTGPVAASATRSPYNRCEACLHMANLYDISEDQLLTDPLVSPTLHHQQQQQ
PDEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLSRPARSVSLKEKDRFL
DSTSDSHYANLFGMRPYSGRLFGTGSKSMFNHNLEESKRSKSLYPAHGSDNPFLSHSLRD
DTSSRLVHGRSSSDIYKQLAVASPAAVLGAPPIKTRNDANNLRSSVKSTTSYCSRDGRIT
NDMYNKEHVMPYSATKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtttggcagaatgtccctcagcagcaaaaggagtaagaggaggagtagaagg
agcagcagctggagcagcagcagcagtggtaggaacagcgcgctgctctccttggctctc
ctggtggtggtgaccctgtttgcggaccccgtggtggcacaaaagcagcggactggtggc
gcctcggataaagtgccggtcctgaacattgcggtgatcctgggacgcacgcgctacatc
tccgacagggacatccgggcgctgtggagcaaggaggaccccattgacgtcaatgtggtc
acactgctggtcaacgagacggacccgaaaagcatcatcactcacatgtgcgacctgatg
tccgggaccaagatccacggggtggtgtttggggatggcaccgaccaggaggccatcgcc
cagattttggattttatttcctcgcagacgctcatacccatcctcggcatccacggaggg
tcgtccatgatcatggctgataaggacgtgaagtcgacgttcttccagttcggcgcctcc
atccagcaggaggctctgctgatgctgaacattatggaggagtacgactggcacatcttc
tccatcgtcacgtcgaagttccccggctaccaggagttcatcaacatcctgaaaacgacc
gtggacaacagttttgtggggtgggacctgcagaacatcatcaccttggacgcggtggag
gaagacagtcggtctcagatcatgctgaagaaggtccagtctcctgtggtcctgctctac
tgctccaaggacgaggcggtcatcatcctggacgaggcccgctccctgggcctcaccgga
tttggatacatctggattgtgccgtcgctcaccaccgggaacccagacataacgcccgaa
gacttcccgtcggggatgatttcggtgtcgtacgacgactgggactacccgctggaggcg
cgggttcgcgacggtttagggatcataacgtcggcagcggcagccatgttggaggagtac
ggcgacatccccgaagccaaaacgtcctgttacggcccgatggagaagacgtccaagctg
ccgcccagcgcactacacaagtacatgatgaatgtgacatgggacggcagagacttgtcg
tttacagaggacggctaccaggaattcccaaagctggtggtgattgttctcaacaaggaa
agggagtgggagaagatgggaaagctggacaaccgcagcctgacactgaagtacccggtg
tggccgcgcttcaactccttcggagacgccgagctggacgacaaccacttgtccatcgtc
actttggaggagaagcctttcgttattgtggaggacgtagagaggctgactggtacctgc
atgaggaactctgtcccctgcagaaagcatatcaaagacaacacaacggaggctggtggg
acatatatcaagaagtgctgcaaaggcttctgtatcgacattctaaagaaaattgccacg
tatgtcaagttcacctatgacctgtacctggtaaccaatggcaagcatggaaagaagata
aacaatgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtc
ggatctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtg
gaaactgggatcagcgtcatggtctcccgtagcaacggaacagtctccccttcagccttc
ctcgagccattcagtgcatcagtgtgggtgatgatgtttgtgatgctcctactggtcact
gcaatggctgtctttatgtttgagtacatcagtcctctgggcttcaacagaaacctggcg
cagggcaaagacccccatggtccttctttcaccatgggcaaggccgtgtggctgctctgg
ggtctggtcttcaacaactctgtgccagtgcagaacccgaagggaaccaccagcaagttc
atcgtgtctgtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctg
gccgccttcatgatccaggaggagttcgtcgaccaagtcaccgggctctcagacaataag
tttcagaacccgtatgcttactcgcctccgttccgcttcgggacggttccaaacggttcc
acagagaggaacatcaggaagaactaccctgccatgcaccagtacatggtgaaatatcat
caaactggcgttgtggacgcacttccctggcagttaaaagcaggtaaactggatgccttc
atctacgatgctgcagtgttgaactacatggcgggcagagatgaagggtgtaagctggtg
accattggcagcgggtacatctttgctactaccggctacggcattgctctacagaaaggc
tcctactggaaacgacaggtggacctggctatcctggccattatcggagatggtgaaatg
gaggaactggaagcccagtggctgacgggtatttgccacaacgagaagaacgaggtgatg
tccagtcagctggatgtggacaacatggccggggtcttctacatgctggccacggccatg
gggctgtcgctcatcacctttgtctctgagcatctcttctactggaggctcagatattgc
ttcaccggggtctgctccggcacgcccgggcttcttttctccattagtcggggaatctgg
agttgtatccatggagtccacattgacatgaagaaaaagacggatatggactttagccct
caggacaaaatgcttaagctcataaagtcagccaaacagatgaccaacatgtctaacctg
gcgggctctcgcttgaactcgcccaaacgtgagttcatgcactccgctggcccaatgatc
atggacatgatggcagagaagggcaacttcatctacgctgacaaccgaagctatgctccc
aaagatatgatctatggggacactggtgacctgcaggcttatctcgctaaccgccacaaa
gaccaccttaacaactacatcttccagggaggccagcatcctctgaccctaaacgatgcc
aatcccaacacagtagaggtggcagtgagtgctgattcagtccagactaatgccaagccg
ccacggaccctgtggaagaagtcagtggacacgctacgttcggtaccacctgggccccct
ccaatgcctgacatgctgatgccagatccacgcatgtcgatgaagacgcagcgctacctc
cctgaggacacagcccactccgacatctccgactgctccagtcgggcagcctcctacaag
gacccagaaaacaacaagcacctgaaacccaaggacaacttaaaaaaaagagctgtgaca
tcaaaatacccaagggattgcagtgaggtggagctgtcctacttaaagactaagcaggtc
cccggcagtaccaaccaaactgggagaggaggaggaggagagaaaatctacactatagac
tcagaccgagagatgagcctgcattcagaccccgttctctatcgcgagagtcgtggcctt
gctgcagatgatttggaataccccgagatctactccgaccacagcgacaactataggaag
tgtgagcagcccatcattcatctgaactcctcacctttgcatcatacagactctgatctc
ctaccagacccagcttactccaaacactacaacctgaaagagaaaaacatgtctgcacat
gaatccatggatcggtacaaacagacacactgccgttcctgcttgtccaaagtgaccgct
agctacccaccagcagggtcatacccacctactggacctgttgcagcttctgccacacgc
tcaccctataatcggtgtgaagcatgcctccacatggccaacctgtatgacattagtgaa
gaccagctcctcacagaccccttggtcagccccaccttgcaccaccaacagcagcagcag
ccagatgaaatgtttggtctgtattggccacagacagacgggccgcatgtccaaaagagg
aatcgcttgaggctgagtcgtcagcactcctttgacaacatcatgctagaaaaacccaag
gatgtagacctgagccgaccggcgcgcagtgtcagcctcaaagagaaggatcgcttccta
gactccacatctgactcgcactatgcgaacctctttggaatgcgtccctattccggcaga
ctgtttggcactgggtccaaatccatgtttaaccacaacctggaggagagcaagaggagc
aaatccctgtacccggcccatggctcggataacccattcctcagccactcgctgagggat
gacaccagcagcagactggtccatgggcgtagttcctctgatatttacaaacagctggca
gtagcttcgcctgcagcggtccttggagcaccccccatcaaaacacgtaacgatgcgaac
aatctccgctcttccgttaaatccaccacttcatactgctcacgggacgggcggataact
aacgacatgtacaataaagagcatgtgatgccttactcagccactaagactagtgcatac
ccggccccgcgtggcgtcctaaactcagcccagttcagcaatagacgggtgtataaaaaa
atccccagtctggagtccgatgtttag
DBGET
integrated database retrieval system
