Hippoglossus hippoglossus (Atlantic halibut): 117767268
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Entry
117767268 CDS
T07778
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03022
Basal transcription factors
hhip03420
Nucleotide excision repair
hhip04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117767268 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
117767268 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117767268 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hhip01001
]
117767268 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117767268 (cdk7)
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117767268 (cdk7)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117767268 (cdk7)
Enzymes [BR:
hhip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
117767268 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
117767268 (cdk7)
Protein kinases [BR:
hhip01001
]
Serine/threonine kinases: CMGC group
CDK family
117767268 (cdk7)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117767268 (cdk7)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
117767268 (cdk7)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117767268 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
APH
DUF1158
Motif
Other DBs
NCBI-GeneID:
117767268
NCBI-ProteinID:
XP_034450633
LinkDB
All DBs
Position
9:complement(17637058..17642777)
Genome browser
AA seq
343 aa
AA seq
DB search
MAHDVKSRAKRYEKLDFLGEGQFATVYKARDKTKNTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMDTDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGSGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGV
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQCLFTFNPSTRSTATQALKMKYFSNRPG
PTPGPQLPQPNCSVEALREKETVGLKRKIEGLETTVMKKKLVF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatgatgtgaagtccagagccaaacgatatgagaaactggatttcctgggcgag
ggtcagttcgccaccgtgtacaaagccagggacaaaaccaaaaacacaatagttgccatt
aaaaagattaaggttggccacaggactgaggctaaagatggcatcaacaggactgcactt
agagagatcaaactgctgcaggagctgcaccatccaaacatcattgggctgctggatgcc
tttggacacaaatctaacatcagtctggtgtttgacttcatggacacagatctagaggtg
atcatcaaggacaccagccttgtcctgactccagccaacatcaaagcttacatcctcatg
actctacagggattagagtacatgcaccagcactgggtcctacacagggatctgaagccc
aataatctgctgttggacggtagcggagtgttgaagttggctgattttggtttggccaaa
tcgtttggcagtcccaacagagtgtacacacaccaagtcgttaccaggtggtatcgctcc
cctgagctcctgtttggtgccaggatgtacggtgtgggtgttgacatgtgggcagtgggc
tgcatcctggcagagttgctccttcggataccattcctcgccggagactctgatctcgac
cagctgactaagatctttgaagctcttgggacgcccacagaagagacatggcctggagta
agcagtctaccggactatgtgtccttcaaaatcttccccggcacacctctggaacatata
tttagtgcagcaggagacgacttactagagcttctacagtgcttattcacctttaacccc
tcgacaaggagcacagctactcaggctctgaagatgaagtacttcagtaaccggcctggt
cccactcctggcccccagctccctcaacccaactgttcagttgaggctctgagggagaag
gaaacagtcggactcaagaggaaaatagaaggactggagacaactgtgatgaagaagaag
ctcgttttctga
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