Hippoglossus hippoglossus (Atlantic halibut): 117774943
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Entry
117774943 CDS
T07778
Symbol
hlcs
Name
(RefSeq) LOW QUALITY PROTEIN: biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00780
Biotin metabolism
hhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
117774943 (hlcs)
Enzymes [BR:
hhip01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
117774943 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
117774943 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
117774943 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
117774943 (hlcs)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
117774943
NCBI-ProteinID:
XP_034463585
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All DBs
Position
14:complement(24803936..24832655)
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AA seq
927 aa
AA seq
DB search
MLITLCYVYMWVRFHKCYSVLIRNSLSRLKGSSFSFSFCSSSPSAPATATPAGVQADARR
YLGSLPPEDIVFLQLGDKAVYLTDPQACDDLSKWTVLLGSSLVRGPQIENISFIIEATGY
RVGCHSRHTSNKKVLKWSDYCLPLACSPGQPFRVVAQTTVDNFSRLGVAFLEGCLQLDNG
LLPSKIVPVVLQESTLSELLEKQCPQSPKTVTSQWLCCTQTKEGVVEPLPCNLLADHRHT
QSHKGSLLLTPQAKRRTEERRGSEPLQGTQDIRLVGDSEDHSMGNNHHMESHGHHLHLSS
CHECLQLENSTIISVKYASAENIPDLPDDNSVELDSRAKTLDEHHQDTGGFFGQSGGFDC
NNKPPNVLVYTDGCQERFQTVCQLLSECIDMENHVIYHLQPQQALSHPWMDNTRLLVVAE
EEALTPQLQTRFLTYLSQGGRVLGLTSTLCPAGLCLEVRERQRMVSRLNFIKEDSTELEL
SVLASGNFYVRDIQGGGEVELWGELKGEVPHQRDMVIVRITHEQDGGQAVLCQVHLEIAP
ENLTTESFDELKVSNALRYEVLTEILISLGLSCELNHDLTPTPIHLLAISLEAKAYFLKW
LETQADQNGFLTLSKHSLRMVSCSELQDGSFLHEGSLDLVTDSSESQSWAEFRMETYRKN
LQTSLLGHNLFYTEMASSTMDLFEGLSLHLPKDVGLIAVAGRQRQGRGRGKNTWLSPLGC
AMFTLKIQVELSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYSNLMK
LGGVLVTSTVIGSTFHLLIGCGFNVTNSNPTVCINDLIQQYNTQHNCSLQPLCCAQLIAR
TVSCLEVLISSFQHGGPDAILPTYYKRWLHSGTKVHLWSEDGIEAEVFGLDHNGFLQVHS
EEHGVVSVEPDGNSFDMLKNLVVIKQC
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgttaataaccttgtgctacgtctacatgtgggtgcggtttcacaagtgctactcggtt
ctgatccgcaacagtctttccagactaaaaggcagcagctttagcttcagcttctgctcc
agctcgccatcagctccagccacagcaacgccagctggagtccaagcagatgcacggcgg
tatctcggctcacttccacccgaggacattgtcttccttcagctgggagacaaggctgtc
tatctcacggatcctcaggcatgtgatgacctcagcaaatggactgtgctgttggggtcc
tctctggttcgtggtccacaaatagagaatatttcattcatcatagaagcaacaggatac
agagtgggctgccattctcgtcacacatcgaataagaaagtgctgaagtggtccgattat
tgtcttcctttggcctgcagccctggccagcccttcagggtggtggctcagaccactgtc
gataacttcagtcggctgggagttgcttttctagaaggttgccttcagctagacaatgga
cttttgccttcaaagatagtccctgttgtcctccaagaatctactctcagtgagctgttg
gagaaacaatgtccacagagcccaaagactgtgacatctcaatggctctgttgtacccag
actaaagagggtgttgttgaacctttaccctgtaacctattagctgaccaccggcacaca
cagagccataaaggcagccttctcctcactccacaggcaaagaggaggactgaggaacga
agagggtcagagccactccaaggtacccaggatataagactggttggtgactctgaagat
cattccatggggaataatcatcatatggagagccatggacaccacctccacctgtccagc
tgccatgaatgtttgcagttggaaaacagcaccatcatctctgttaaatatgcatcagcg
gagaacattccagaccttcctgatgataactcagttgagctggatagtagagctaagact
ttggatgaacatcaccaagacactggaggcttttttggtcaaagtgggggttttgactgt
aataacaaaccaccaaatgttctggtgtacacggatggttgccaggagcgttttcaaact
gtttgccaacttttatcagagtgtatagacatggaaaaccatgtaatatatcatctccaa
ccacagcaggcgctgagccatccatggatggacaacaccaggctcctggttgtggcagaa
gaggaagccctgaccccccaacttcagacccgctttctcacctaccttagccagggtggc
agggtcttggggcttacatctaccctgtgccctgcaggcctttgtctggaagtcagggag
aggcaaagaatggtcagcaggctgaacttcattaaggaagacagcacagagctggaactg
agcgtgttggcgagtgggaacttctatgtcagggatattcagggaggaggggaagtggag
ctttggggagagctgaaaggggaggtccctcatcagagggatatggtaatcgtcagaatt
acccatgaacaagatggtgggcaagctgtcctttgtcaggtccacctggaaattgcacct
gagaatttgacgactgaaagttttgatgaactgaaggtcagcaatgcactgcgttatgaa
gtcttgacagaaatcctcatatctttgggactcagctgtgaactaaaccatgatctgact
ccaaccccaattcacctgctggccatctctctggaggcaaaggcctacttcctgaagtgg
ctggagacacaagcagatcaaaatggcttcctcacattgtccaagcactccctgaggatg
gtatcctgctctgagctgcaggatggttcttttttgcatgagggttctctggacctggtc
accgactcttctgagtctcagagctgggcggagttcagaatggagacctacaggaagaac
ctacagaccagtctgctcggacataacctgttttacactgagatggcatcgtctacgatg
gacctgtttgaagggttaagtctacatttaccaaaagatgtgggtttaatagcagtagct
ggtcgacaaagacagggaagaggtcggggcaagaacacctggctcagccctctgggttgt
gctatgttcactctaaagatccaagttgagctgagctctaggctcggacaaaggattccc
ttcctccagcacctagctgctctggcagtggtggaggctgttcgcacactgcctggatac
caggacatagacctgcgagtgaaatggcccaatgacatctactatagtaacctgatgaag
cttgggggagtactggtgacttccactgttataggatcgacttttcatctgctcataggc
tgtgggttcaatgtgacaaacagcaatccaactgtctgcatcaatgacctgatccagcaa
tacaacacacagcataactgcagtctgcaaccgctttgctgcgcccaactcattgctcgc
actgtcagctgtctggaggtcctcatcagcagcttccaacatggaggcccagatgcaatc
ctgcccacatactataagagatggctacacagcgggaccaaggtgcatctttggagtgag
gatggaatagaagctgaggtgttcggactggaccacaatggcttcctccaagtgcacagt
gaggagcatggcgtggtctcagtggagcctgatggaaactcctttgacatgctgaagaac
ctggtggtcatcaagcagtgctaa
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